Using crop-pathogen modeling to identify plant traits to control Zymoseptoria tritici epidemics on wheat

C Gigot, D Claessen, G Garin, C Fournier… - … Cereal section Meeting …, 2018 - hal.science
transposable elements (TEs). Our results show that 14% of the genes are variable within this
panel. In addition, they reveal a very high level of intra- and interspecific variability affecting …

Dissecting the Pyrenophora tritici-repentis (tan spot of wheat) pangenome

R Gourlie, M McDonald, M Hafez, R Ortega-Polo… - BioRxiv, 2022 - biorxiv.org
… In addition, we identified the potential involvement of transposable elements in genome
expansion and the movement of virulence factors. The ability of effector-coding genes to shuffle …

Comparative pathogenomics in the ascomycete plant pathogens Zymoseptoria tritici and Verticillium dahliae

H Gibriel - 2019 - search.proquest.com
… the adaptation of the fungal pathogen Zymoseptoria tritici that is specialized on wheat plants,
… identify novel orphan genes and species-specific invasions of transposable elements. G3 5:…

[PDF][PDF] transposable elements contribute to fungal genes and impact fungal lifestyle

K Ginalski - core.ac.uk
… We systematically analysed genomic location of transposable elements (TEs) in 625 publicly
… proteins encoded by genes with old transposable elements insertions have significantly …

[PDF][PDF] QTL mapping of virulence traits in Zymoseptoria tritici

E Stewart - 2016 - research-collection.ethz.ch
… The aim of this study was to elucidate the genetic architecture of in planta virulence traits
in the fungal plant pathogen Zymoseptoria tritici. Z. tritici is the causal agent of Septoria Tritici

A Near-Complete Haplotype-Phased Genome of the Dikaryotic Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici Reveals High Interhaplotype Diversity

B Schwessinger, J Sperschneider, WS Cuddy… - MBio, 2018 - Am Soc Microbiol
… assembly before filtering for genes related to transposable elements (TE). Our final assembly
… as Zymoseptoria tritici, V. dahliae, U. maydis, and Phytophthora infestans (3, 75, 77, 78). …

… the tomato pathogen Cladosporium fulvum uncovers additional accessory chromosomes and structural variations induced by transposable elements effecting the loss …

AZ Zaccaron, I Stergiopoulos - BMC biology, 2024 - Springer
… In fungi, accessory chromosomes have been reported in many species [17, 28,29,30,31,32],
including the wheat pathogen Zymoseptoria tritici which has eight accessory chromosomes, …

[HTML][HTML] Recent loss of the Dim2 DNA methyltransferase decreases mutation rate in repeats and changes evolutionary trajectory in a fungal pathogen

M Möller, M Habig, C Lorrain, A Feurtey… - PLoS …, 2021 - journals.plos.org
… Strains of the plant pathogenic fungus Zymoseptoria tritici appeared to lack cytosine … of
transposable elements in this fungus has been associated with rapid evolution, not only in Z. tritici

A fungal wheat pathogen evolved host specialization by extensive chromosomal rearrangements

FE Hartmann, A Sánchez-Vallet, BA McDonald… - The ISME …, 2017 - academic.oup.com
… on a global collection of 106 strains of Zymoseptoria tritici, the most damaging pathogen of
… A large cluster of transposable elements in direct proximity to the locus generated extensive …

Long noncoding RNAs emerge from transposon-derived antisense sequences and may contribute to infection stage-specific transposon regulation in a fungal …

J Qian, HMM Ibrahim, M Erz, F KŘmmel, R Panstruga… - Mobile DNA, 2023 - Springer
transposable elements (TEs). In the absence of the otherwise common repeat-induced point
mutation transposon … leaf blotch pathogen Zymoseptoria tritici inducing expression of distinct …