… enables the relative number of substitutions along each branch to be inferred with less
error (Britton 2005). With no rate variation, such that the substitution rate is the same on every …

… of rate variation are generally either uncorrelated, so that each lineage-specific rate is … ,
or autocorrelated so that lineage-specific rates evolve from the rates of their parent lineages …

… Under the lineagespecific model M1, we only allow lineages … We identify target lineage-specific
accelerations from loci … , we estimate 882 loci to have strong target lineage-specific …

… new method is much more accurate and precise at estimating … difficult to explain by
lineage-specific processes of diversification. … Specifically, we use the Dirichlet process as a prior …

… that will accurately capture the distribution of substitution rates and patterns across sites?
These have … A dirichlet process prior for estimating lineage-specific substitution rates. Mol. Biol. …

… simulated lineage-specific rates of continuous-character evolution by drawing the background
rate for … We estimated a chronogram under a partitioned substitution model assuming an …

… We identify target lineage-specific accelerations from elements that best fit Embedded …
estimate 882 elements to have strong target lineage-specific acceleration. The average conserved …

… a novel, computationally tractable Bayesian approach to finding … estimated the false positive
rate of the approach, which was about 2% in the simulations performed. We also estimated …

… a Dirichlet process mixture to achieve rate heterogeneity. … variations in lineage-specific
evolutionary rates over time and … prior to starting the marginal likelihood estimation process, …

… We also show that previous estimates of co-expansion … of expected substitutions per site.
Alternatively, if a mutation … We specified the concentration parameter of the Dirichlet process so …