The mutational landscape of the SCAN‐B real‐world primary breast cancer transcriptome
C Brueffer, S Gladchuk, C Winter… - EMBO molecular …, 2020 - embopress.org
… from RNA sequencing (RNA-seq) data. The mutational landscape of 3,217 primary breast
cancer … Large-scale projects such as TCGA and SCAN-B generate vast amounts of data, but …
cancer … Large-scale projects such as TCGA and SCAN-B generate vast amounts of data, but …
Somatic mutation landscapes at single-molecule resolution
… samples, enabling studies of somatic mutagenesis in large-scale cohorts, across genetic …
inferred from the sequencing data (using Piccard’s software). This analysis revealed that, for …
inferred from the sequencing data (using Piccard’s software). This analysis revealed that, for …
RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues
… Large-scale studies analyzing DNA sequencing data are needed to better distinguish … the
disease while considering the nonpathogenic landscape of mutations. Such findings may have …
disease while considering the nonpathogenic landscape of mutations. Such findings may have …
[HTML][HTML] Characterization of the genomic landscape and actionable mutations in Chinese breast cancers by clinical sequencing
GT Lang, YZ Jiang, JX Shi, F Yang, XG Li… - Nature …, 2020 - nature.com
… large-scale prospective clinical sequencing program using the Fudan-BC panel, and
comprehensively analyze the clinical and genomic … A pairwise analysis revealed that the PI3K and …
comprehensively analyze the clinical and genomic … A pairwise analysis revealed that the PI3K and …
The landscape of somatic mutation in cerebral cortex of autistic and neurotypical individuals revealed by ultra-deep whole-genome sequencing
… enrichment of mutations in coding and putative regulatory regions. Our analysis reveals that
the first cell division after fertilization produces ~3.4 mutations, followed by 2–3 mutations in …
the first cell division after fertilization produces ~3.4 mutations, followed by 2–3 mutations in …
Mutational landscape of the transcriptome offers putative targets for immunotherapy of myeloproliferative neoplasms
F Schischlik, R Jäger, F Rosebrock… - Blood, The Journal …, 2019 - ashpublications.org
… Using whole-transcriptome sequencing, we analyzed RNA from granulocytes of 104 … for
which mutations in the splicing machinery have been described. This analysis revealed that the 3…
which mutations in the splicing machinery have been described. This analysis revealed that the 3…
[HTML][HTML] Landscape of transcriptome variations uncovering known and novel driver events in colorectal carcinoma
… -neoplastic tissues were subjected to high-throughput transcriptome sequencing. … mutations
in neoplastic cells, but large-scale mutation profiling is not available for each tumour. RNA-…
in neoplastic cells, but large-scale mutation profiling is not available for each tumour. RNA-…
[HTML][HTML] Characterization of the genomic landscape in large-scale Chinese patients with pancreatic cancer
X Zhang, T Mao, B Zhang, H Xu, J Cui, F Jiao… - …, 2022 - thelancet.com
… This study comprehensively reported the real-world genomic characteristics of large-scale
patients with pancreatic cancer by clinical sequencing from China which is conducive to …
patients with pancreatic cancer by clinical sequencing from China which is conducive to …
[HTML][HTML] Single-cell genomic and transcriptomic landscapes of primary and metastatic colorectal cancer tumors
… The high-precision single-cell RNA sequencing protocol we used was a modified STRT-…
before treatment, cells basically do not experience large-scale cell death, so the possibility of …
before treatment, cells basically do not experience large-scale cell death, so the possibility of …
[HTML][HTML] Feasibility of whole genome and transcriptome profiling in pediatric and young adult cancers
N Shukla, MF Levine, G Gundem, D Domenico… - Nature …, 2022 - nature.com
… workflows to process large-scale data within clinically … cWGTS analyses revealed a profoundly
rearranged genome … patterns demonstrating that cancer genomic landscape can be fully …
rearranged genome … patterns demonstrating that cancer genomic landscape can be fully …