Refactoring Ehrlich Pathway for High-Yield 2-Phenylethanol Production in Yarrowia lipolytica

Y Gu, J Ma, Y Zhu, P Xu - ACS Synthetic Biology, 2020 - ACS Publications
strain produced 2-PE over 1200 mg/L. Then the top-performed strains were further validated
… ylDGA2 deletion on lipid production, we measured the lipid titer in strains po1fk4P5, po1fk5P…

A VersaTile-driven platform for rapid hit-to-lead development of engineered lysins

H Gerstmans, D Grimon, D Gutiérrez, C Lood… - Science …, 2020 - science.org
strains, with more than half of them inhibiting all strains. … By extension, VersaTile can be used
to create DNA libraries that … the EMBOSS needle tool to verify both the order and the type of …

Spatiotemporal developmental trajectories in the Arabidopsis root revealed using high-throughput single-cell RNA sequencing

T Denyer, X Ma, S Klesen, E Scacchi, K Nieselt… - Developmental cell, 2019 - cell.com
… Following library production and sequencing, transcripts from individual cells can be
identified from the bead-derived barcode and individual transcripts accounted for using unique …

… ecosystem-specific reference databases with species-level resolution by high-throughput full-length 16S rRNA gene sequencing and automated taxonomy …

MS Dueholm, KS Andersen, SJ McIlroy, JM Kristensen… - MBio, 2020 - Am Soc Microbiol
… and an analysis of 7,816 sequences previously obtained from the eight-strain ZymoBiomics
microbial community DNA standard (26) (see Text S1 in the supplemental material). …

Genome engineering of E. coli for improved styrene production

L Liang, R Liu, KEO Foster, S Cook, JC Cameron… - Metabolic …, 2020 - Elsevier
… enable high throughput and scalable polystyrene production. … the FDC1 RBS library into the
host strain, and we observed a … After reconstruction and genomic verification of this edit, we …

[HTML][HTML] Investigation of gut microbiome changes in type 1 diabetic mellitus rats based on high-throughput sequencing

Q Ma, Y Li, J Wang, P Li, Y Duan, H Dai, Y An… - Biomedicine & …, 2020 - Elsevier
DNA were extracted, 16S rRNA microbial gene clone library were constructed, and lastly
high-throughput sequencing … protect intestinal barrier function by producing short-chain fatty …

Ultra-high throughput mapping of genetic design space

RW O'Connell, K Rai, TC Piepergerdes, Y Wang… - BioRxiv, 2023 - biorxiv.org
… development of bioproduction strains 61 and multigenic … DNA sources and cloned into
kanamycin resistant sub-part entry vectors using BpiI (Thermofisher) (level 0). Sequence-verified

High-efficiency nuclear transformation of the microalgae Nannochloropsis oceanica using Tn5 Transposome for the generation of altered lipid accumulation …

H Osorio, C Jara, K Fuenzalida, E Rey-Jurado… - Biotechnology for …, 2019 - Springer
high-efficiency method for the generation of random mutant strains at the level of genomic
DNA … To verify that we obtained mutant clones of the lipid accumulation populations selected, …

High-throughput sequencing approach to characterize dynamic changes of the fungal and bacterial communities during the production of sufu, a traditional Chinese …

D Xu, P Wang, X Zhang, J Zhang, Y Sun, L Gao… - Food …, 2020 - Elsevier
DNA extraction by GMO food DNA Extraction Kit (Tiangen, Beijing, China) following the
manufacturer's protocol. The total DNA concentration and quality were checked … specific strains of …

Bio-On-Magnetic-Beads (BOMB): Open platform for high-throughput nucleic acid extraction and manipulation

P Oberacker, P Stepper, DM Bond, S Höhn… - PLoS …, 2019 - journals.plos.org
… been validated in both modular and high-throughput settings. … as DNA library construction
for next-generation sequencing [4]. … Plasmid extraction from cultured Escherichia coli strains is …