YEASTRACT+: a portal for cross-species comparative genomics of transcription regulation in yeasts

PT Monteiro, J Oliveira, P Pais, M Antunes… - Nucleic acids …, 2020 - academic.oup.com
… The YEASTRACT+ information system (http://YEASTRACT-PLUS.org/) is a wide-scope …
genomic levels in yeasts of biotechnological or human health relevance. YEASTRACT+ is a new

The Model System Saccharomyces cerevisiae Versus Emerging Non-Model Yeasts for the Production of Biofuels

MP Lacerda, EJ Oh, C Eckert - Life, 2020 - mdpi.com
… -Cas systems for genome editing and regulation and other tools to enable high throughput
methods. Below we describe these systems available for model and non-model yeasts. A …

Genome editing systems across yeast species

Z Yang, M Blenner - Current opinion in biotechnology, 2020 - Elsevier
… CRISPR-Cas9 was leveraged to study functional genomics of Y. … yeast genome editing
systems were discussed in this review and a comparison of the yeast genome editing systems

Chromosome level assembly and comparative genome analysis confirm lager-brewing yeasts originated from a single hybridization

AN Salazar, AR Gorter de Vries, M Van Den Broek… - BMC genomics, 2019 - Springer
… of whole genome sequencing data of the Saccharomyces pastorianus strain CBS 1483
using 4 flow cells on Oxford Nanopore Technology’s MinION platform. Based on a genome size …

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

SR Engel, ED Wong, RS Nash, S Aleksander… - Genetics, 2022 - academic.oup.com
… , any new names for yeast genes must conform to the standard format. The SGD Gene
Registry (https://www.yeastgenome.org/reserved_name/new) is the agreed-upon system used by …

Limited DNA repair gene repertoire in ascomycete yeast revealed by comparative genomics

S Milo, R Harari-Misgav… - Genome Biology and …, 2019 - academic.oup.com
… DNA repair is important for fungal survival and genome evolution. Here, we describe a
detailed comparative genomic analysis of DNA repair genes in Ascomycota. We determined the …

[HTML][HTML] Benchmarking two Saccharomyces cerevisiae laboratory strains for growth and transcriptional response to methanol

MI Espinosa, TC Williams, IS Pretorius… - Synthetic and systems …, 2019 - Elsevier
… like the yeast Saccharomyces cerevisiae attractive … yeast synthetic biology and metabolic
engineering, yet they have unpredictable metabolic phenotypes related to their many genomic

CRISPR system in the yeast Saccharomyces cerevisiae and its application in the bioproduction of useful chemicals

R Mitsui, R Yamada, H Ogino - World Journal of microbiology and …, 2019 - Springer
systems in bacteria have been used as tools for genomesystem has been used in various
yeast, bacterial, and mammalian cells. Saccharomyces cerevisiae is a nonpathogenic yeast, …

Genomic Adaptation of Saccharomyces Species to Industrial Environments

K Giannakou, M Cotterrell, D Delneri - Frontiers in Genetics, 2020 - frontiersin.org
… Population genomic studies of hundreds of Saccharomyces yeast strains reveal a remarkable
level of variation in recombination rates and patterns even across very closely related …

Physiological and comparative genomic analysis of new isolated yeasts Spathaspora sp. JA1 and Meyerozyma caribbica JA9 reveal insights into xylitol production

D Trichez, AS Steindorff, CEVF Soares… - FEMS yeast …, 2019 - academic.oup.com
Comparative genomic analysis revealed that the predicted xylose metabolic pathway is
conserved among the xylitol-producing yeasts Spathaspora sp. JA1, M. caribbica JA9 and …