[HTML][HTML] … synergistic mechanism of Chinese herbal medicine in the treatment of atrial fibrillation with obstructive sleep apnea hypopnea syndrome by network …

T Mao, J Zhang, Y Qiao, B Liu, S Zhang - … Based Complementary and …, 2019 - hindawi.com
… in the network. e three parameters contain degree centrality (DC), betweenness centrality
(… Baryshnikova, “Exploratory analysis of biological networks through visualization, clustering, …

[PDF][PDF] Identification of atrial fibrillation-associated lncRNAs and exploration of their functions based on WGCNA and ceRNA network analyses

Y Liu, X Liang, J Wang, Y Wang, X Liu… - Gen Physiol …, 2021 - academia.edu
… In conclusion, our results may provide novel molecular mechanisms and potential … gragh
(SC) and eigenvector centrality (EC) of each protein in the PPI network was computed using the …

[PDF][PDF] Analysis of differential gene expression in response to anisotropic stretch using a systems model of cardiac myocyte mechanotransduction

S Cao, K Buchholz, PM Tan, Y Aboelkassem… - Biophysical …, 2020 - cell.com
… A graph node centrality analysis showed that 22 signaling molecules … A novel image-processing
MATLAB-based algorithm was … within the mouse right atrium which impact their Ca2þ …

[PDF][PDF] Modelling the Nucleotide Metabolic Network of a Genetically Minimal Cell

TA Brier, D Bianchi, ZR Thornburg, MC dos Reis Melo… - Biophysical …, 2020 - cell.com
… A graph node centrality analysis showed that 22 signaling … within the mouse right atrium
which impact their Ca2+ … We include, as a novel feature, the effects of varying concentrations of …

Detection of Genes in Arabidopsis thaliana L. Responding to DNA Damage from Radiation and Other Stressors in Spaceflight

V Manian, J Orozco-Sandoval, V Diaz-Martinez - Genes, 2021 - mdpi.com
… under low radiation doses suggesting novel mechanisms of DNA damage response … network
starting and ending at a node. Centrality measures are used widely in biological networks

[PDF][PDF] Biological Applications for Online Methods of Resource Allocation

A Boskovic, A Carter, J Jeong - Biophysical Journal, 2020 - cell.com
… A graph node centrality analysis showed that 22 signaling molecules … A novel image-processing
MATLAB-based algorithm was … within the mouse right atrium which impact their Ca2+ …

Bioinformatics analysis of competing endogenous RNA network and immune infiltration in atrial fibrillation

X Liu, K Peng, G Zhong, M Wu, L Wang, I Ashok - Genetics Research, 2022 - cambridge.org
network, and the Maximal Clique Centrality (MCC) arithmetic of the Cytoscape plug-in
cytoHubba was used to filter hub genes in the PPI network. … networks, our findings provide novel

[PDF][PDF] DOMINO: a novel algorithm for network-based identification of active modules with reduced rate of false calls

H Levi, R Elkon, R Shamir - Mol Syst Biol, 2021 - scholar.archive.org
… The challenge of identifying modules in biological networks, frequently referred to as
network-… scores by AMI methods for integrated analysis of GWAS data and biological networks. …

Graph theory-based simulation tools for protein structure networks

KF Kantelis, V Asteriou… - … Modelling Practice and …, 2022 - Elsevier
… Using the constructed protein structure network, the residue-based betweenness centrality
… study, containing both AF and non-AF atrial tissue sample data which, after preprocessing, …

Graph signal processing, graph neural network and graph learning on biological data: a systematic review

R Li, X Yuan, M Radfar, P Marendy, W Ni… - IEEE Reviews in …, 2021 - ieeexplore.ieee.org
… processes and develop novel healthcare solutions for complex … over the graph than the
atrial activity, the ventricular activity … frameworks applied to multi-relational biological networks, …