… a, Representative proportions of transcript categories after removal of unmapped reads
obtained for 10-pooled and single bacteria in this study and from Salmonella bulk RNA-seq …

… identified in our RNA-Seq dataset, we performed reverse transcription polymerase chain …
confirm the expression pattern of these genes identified in the RNA-seq experiment (Fig 4). …

… of how bacteria sense and respond to various environments. Therefore to help reveal the …
All of the transcripts had significant matches in the nr NCBI database. The details regarding …

… developed to identify them from RNA-seq data, which are efficient … bacterial sRNAs. We
present APERO, a new algorithm to detect small transcripts from paired-end bacterial RNA-seq …

… of the commonly used bacterial and eukaryotic Illumina-based RNA-seq protocols (Fig. 3a),
… ,33 , this transcript class is commonly depleted in both bacterial and eukaryotic RNA-seq to …

… between standard RNA-seq and SEnd-seq. Dashed lines highlight the sharp boundaries of
transcripts delineated by SEnd-seq, which are obscured in standard RNA-seq. bp, basepair. …

… Breakthroughs in methods to analyse total bacterial RNA content (tiling array and RNA-seq
sequencing technologies) lead to the complete characterisation of transcriptomes with a …

… we uncover a divergent transcriptional response of the bacteria … We use an enrichment
protocol for bacterial transcripts, … vivo environment, with broader application in understanding the …

… The second dataset, that we used, RNA-seq data originated from primary breast tumour and
… the presence of bacterial transcript, what means it is not the numbers of bacteria that lies …

… revealed a major difference between infected and uninfected samples (Figure 2A). Fish
transcript profiles … plecoglossicida transcript profiles identified two groups (Figure 2B). Some host …