Characterisation of APOBEC3B-Mediated RNA Editing in Breast Cancer Cells Reveals Regulatory Roles of NEAT1 and MALAT1 lncRNAs
P Clarke, C Zhang, Y Lu, M Wang, B Chen, F Xiong… - 2023 - researchsquare.com
… the identi cation of transcriptome-wide A3B-mediated RNA editing sites and their cellular or
… We interpreted this as a re ection of the dynamic nature of A3B action, where A3B brie y binds…
… We interpreted this as a re ection of the dynamic nature of A3B action, where A3B brie y binds…
Dual Isoform Sequencing Reveals a Multifaceted Transcriptional Architecture of a Prototype Baculovirus
… splice junctions, while 1 at a less common GC/AG. Chen and colleagues associated a spliced
… Brie y: End repair was carried out on cap selected and barcoded samples using NEBNext …
… Brie y: End repair was carried out on cap selected and barcoded samples using NEBNext …
[PDF][PDF] LPAR5 confers cancer cells radioresistance associated with EMT activation via ERK/Snail pathway
DF Xie, X Huang, H Guan, C Bai - 2022 - scholar.archive.org
… cells to radiotherapy, we performed transcriptome-wide RNA-sequencing (RNA-seq) assays
in HeLa cells 0.5h post 4Gy of γ-rays irradiation and control cells. … Brie y, 10 μL/well CCK8 …
in HeLa cells 0.5h post 4Gy of γ-rays irradiation and control cells. … Brie y, 10 μL/well CCK8 …
The translational landscape of HIV-1 infected cells reveals novel gene regulatory principles
N Caliskan, A Kibe, S Buck, AS Gribling, O Gilmer… - 2023 - researchsquare.com
… Brie y, we sorted the P-site coverage per codon derived from PRICE (peaks) into individual
… All in all, alternative ORFs that we identi ed together with the novel splice isoforms in HIV-1 …
… All in all, alternative ORFs that we identi ed together with the novel splice isoforms in HIV-1 …
Polymorphism in maternal HLA-DRB5 is associated with the risk of preeclampsia in Chinese population
C Xu, L Zhou, Q Fang, Y Liu, J Yang, L Luo, S Li, P Guo… - 2023 - researchsquare.com
… information and sQTL curating splicing-related information. S-… Brie y, the PE cases and
healthy controls were randomly … expression data and transcriptome-wide disease association …
healthy controls were randomly … expression data and transcriptome-wide disease association …
Transcriptional Landscape of Pathogen-responsive Lncrnas Reveals OS_LNC1812-Induced Disease Resistance by Abscisic Acid Pathway in Rice
W Cao, L Gan, J Cao, Y Li, J Gao, C Li, C Zhu - 2021 - researchsquare.com
… Analysis of RNA sequencing of rice leaves infected with the … 724 lncRNA were derived from
alternative splicing (AS) events and … In plant, transcriptome-wide studies shown that lots of …
alternative splicing (AS) events and … In plant, transcriptome-wide studies shown that lots of …
[PDF][PDF] Abnormal brain protein abundance and mRNA expression of SARM1 in amyotrophic lateral sclerosis
Y Ma, F Qin, T Jia, Y He, F Han, C Zhang - 2023 - assets-eu.researchsquare.com
… Brie y, this is a cross-ancestry GWAS meta-analysis including 29 612 ALS patients and
122 … [16]’s study, they conducted a two-stage transcriptome-wide study and with the …
122 … [16]’s study, they conducted a two-stage transcriptome-wide study and with the …
Nuclear PKM2 promotes pre-mRNA processing by binding folded RNA G-quadruplexes
D Anastasakis, M Apostolidi, J Rinehart, M Hafner - 2022 - researchsquare.com
… gene regulation on a transcriptome-wide level using loss- and gain-… sites and that 3.) we did
not observe systematic splicing changes in … Brie y, 10 × 15 cm plates at 70% con uency cells …
not observe systematic splicing changes in … Brie y, 10 × 15 cm plates at 70% con uency cells …
Fragile X mental retardation protein regulates glycolytic gene expression under chronic hypoxia
K Kawata, Z Zhang, Y Ogura, X Sun, AN Ozeki… - 2024 - researchsquare.com
… Brie y, we cultured HCT116 cell for 36 h in normoxic or hypoxic … cells without UV crosslinking
as negative controls in normoxic or hypoxic conditions. We performed proteomic analysis …
as negative controls in normoxic or hypoxic conditions. We performed proteomic analysis …
[HTML][HTML] Serotonin limits generation of chromaffin cells during adrenal organ development
P Kameneva, VI Melnikova, ME Kastriti… - Nature …, 2022 - nature.com
… cells (both conditions combined) using Smart-seq2 technology, which allows an extraordinary
deep sequencing of individual cells (7000/8000 genes per cell on … in differential splicing of …
deep sequencing of individual cells (7000/8000 genes per cell on … in differential splicing of …