The methylation pattern for knee and hip osteoarthritis

Z Wu, L Shou, J Wang, T Huang, X Xu - Frontiers in Cell and …, 2020 - frontiersin.org
knee and hip osteoarthritis, we analyzed the methylation profiles in cartilage of 16 OA hip
samples, 19 control hip … With the mRMR analysis, we identified the top 300 most representative …

Genome-wide analysis of aberrant methylation of enhancer DNA in human osteoarthritis

X Lin, L Li, X Liu, J Tian, W Zheng, J Li, L Wang - BMC Medical Genomics, 2020 - Springer
… those in HumanMethylation27; however, the sample size was relatively small (5 patients
with hip OA, 6 patients with knee OA and 7 hip cartilage samples) [15]. Rushton et al. profiled …

Role of epigenomics in bone and cartilage disease

JBJ van Meurs, CG Boer… - Journal of Bone and …, 2019 - academic.oup.com
… For osteoporosis, this would be bone, but for osteoarthritis, the tissue of interest is less … the
possibility of clustering a subset of patients characterized by methylation differences in (or near…

Genome-wide DNA methylation profiling of hip articular cartilage identifies differentially methylated loci associated with osteonecrosis of the femoral head

J Wu, Y Du, J Song, X Dang, K Wang, Y Wen, F Zhang… - Bone, 2019 - Elsevier
… The aim of this study was to characterize the genome-wide DNA methylation profile of hip
cartilage obtained from … Primary osteoarthritis (OA) is a chronic degenerative joint disease …

[HTML][HTML] Enrichment of genomic pathways based on differential DNA methylation profiles associated with knee osteoarthritis pain

S Montesino-Goicolea, L Meng, A Rani, Z Huo… - Neurobiology of Pain, 2022 - Elsevier
… enrichment analysis using Ingenuity Pathway Analysis (IPA) to … Second, our analysis was
based on whole blood samples … ) or to cartilaginous and bone tissue related to OA disease (eg …

[HTML][HTML] Identification of long non-coding RNAs expressed in knee and hip osteoarthritic cartilage

B Ajekigbe, K Cheung, Y Xu, AJ Skelton… - Osteoarthritis and …, 2019 - Elsevier
… When we previously used microarray analysis to explore gene expression changes in normal
and OA cartilage of hip and knee, we similarly found a limited overlap (approximately 10%…

An epigenome-wide view of osteoarthritis in primary tissues

P Kreitmaier, M Suderman, L Southam… - The American Journal of …, 2022 - cell.com
osteoarthritis-affected individuals undergoing knee replacement surgery. We perform an
epigenome-wide association study of knee cartilage … ID to ensure paired analysis design and 18 …

Effect of DNA methylation on gene transcription is associated with the distribution of methylation sites across the genome in osteoarthritis

P Yi, X Xu, J Yao, B Qiu - … and Therapeutic Medicine, 2021 - spandidos-publications.com
… commonly by treating the DNA with bisulfite followed by analysis via Illumina 450K microarray
(… Volcano plots for DEGs between osteoarthritis and normal cartilage from the datasets (A) …

Analysis of mRNA expression and DNA methylation datasets according to the genomic distribution of CpG sites in osteoarthritis

P Yi, X Xu, J Yao, B Qiu - Frontiers in Genetics, 2021 - frontiersin.org
… We used ChAMP methylation analysis and the Limma … and human knee cartilage samples
in OA. Function enrichment … reporting the DNA methylome in OA of the knee and hip revealed …

Assessment of DNA methylation patterns in the bone and cartilage of a nonhuman primate model of osteoarthritis

G Housman, LM Havill, EE Quillen, AG Comuzzie… - Cartilage, 2019 - journals.sagepub.com
DNA methylation patterns in femur bone and cartilage of age-matched female baboons, 5
with and 5 without knee … array in identifying DNA methylation patterns in baboon DNA and of …