[HTML][HTML] Improving bioinformatics prediction of microRNA targets by ranks aggregation
… to rerank them into a single list. Instead of deciding which prediction … An example of miRabel
web interface is shown using … those of the authors and do not necessarily represent those of …
web interface is shown using … those of the authors and do not necessarily represent those of …
VarFish: comprehensive DNA variant analysis for diagnostics and research
M Holtgrewe, O Stolpe, M Nieminen… - … acids research, 2020 - academic.oup.com
… In the light of rapid growth and frequent updates of public … or advanced bioinformatics
skills. Here, we report on our … a growing list of databases with Table 2 showing a list of the …
skills. Here, we report on our … a growing list of databases with Table 2 showing a list of the …
InterPro in 2022
T Paysan-Lafosse, M Blum, S Chuguransky… - … acids research, 2023 - academic.oup.com
… , including updates to data content and to the website. These … list of matches in the protein
sequence viewer and the full list … run further bioinformatics analysis to suit their research needs…
sequence viewer and the full list … run further bioinformatics analysis to suit their research needs…
[HTML][HTML] Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources
… Furthermore, there is no comprehensive list of tools to aid those … The year of last update
was assumed to be the year of … These often do not include the exact phosphorylation site, but …
was assumed to be the year of … These often do not include the exact phosphorylation site, but …
TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes
JP Meier-Kolthoff, JS Carbasse… - … acids research, 2022 - academic.oup.com
… high-level facilities providing access to bioinformatic algorithms, a … LPSN databases, including
updates and improvements which … Users are advised to register for the LPSN mailing list …
updates and improvements which … Users are advised to register for the LPSN mailing list …
[HTML][HTML] A joint NCBI and EMBL-EBI transcript set for clinical genomics and research
J Morales, S Pujar, JE Loveland, A Astashyn, R Bennett… - Nature, 2022 - nature.com
… because a few RefSeq transcripts do not perfectly match the … However, we will allow updates
on the rare occasion that … A complete list of MANE transcripts with RefSeq and Ensembl …
on the rare occasion that … A complete list of MANE transcripts with RefSeq and Ensembl …
The IMG/M data management and analysis system v. 6.0: new tools and advanced capabilities
IMA Chen, K Chu, K Palaniappan, A Ratner… - … acids research, 2021 - academic.oup.com
… (D) The list shows all metagenome bins in the Nodule … bioinformatics experience. In order
to support this growth, we will continue improving the annotation pipeline (including the update …
to support this growth, we will continue improving the annotation pipeline (including the update …
Software tools, databases and resources in metabolomics: updates from 2018 to 2019
… stability of bioinformatics software. Mangul et al. (2019) … windows and generates a single
peak list for the full spectrum, … mass spectrometry based data by performing steps such as data …
peak list for the full spectrum, … mass spectrometry based data by performing steps such as data …
[HTML][HTML] SLIM: a flexible web application for the reproducible processing of environmental DNA metabarcoding data
… We introduce SLIM, an open-source web application that simplifies the creation and execution
of metabarcoding data processing pipelines through an intuitive Graphic User Interface (…
of metabarcoding data processing pipelines through an intuitive Graphic User Interface (…
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
… list of partnered, crosslinked resources as well as applicable direct data import options to
facilitate our regular data updates. … Incorporation into the German bioinformatics infrastructure …
facilitate our regular data updates. … Incorporation into the German bioinformatics infrastructure …