[HTML][HTML] Genome-wide association studies
… , including the collection of DNA and phenotypic information … using power calculations in
software tools such as CaTS 14 … 132 and performing large-scale experimental perturbation of …
software tools such as CaTS 14 … 132 and performing large-scale experimental perturbation of …
[HTML][HTML] Recommendations for choosing the genotyping method and best practices for quality control in crop genome-wide association studies
S Pavan, C Delvento, L Ricciardi, C Lotti, E Ciani… - Frontiers in …, 2020 - frontiersin.org
… species, and deliver an overview of bioinformatics tools that can be used to accomplish all
… used to interrogate complementary fragments from DNA samples and infer genotypes based …
… used to interrogate complementary fragments from DNA samples and infer genotypes based …
[HTML][HTML] Confounding of linkage disequilibrium patterns in large scale DNA based gene-gene interaction studies
M Joiret, JM Mahachie John, ES Gusareva… - BioData mining, 2019 - Springer
… Reduction as one large-scale epistasis detection tool. Its … complex diseases in genome-wide
association studies (GWAS). The … The core idea of MB-MDR is to pool 2-locus genotypes …
association studies (GWAS). The … The core idea of MB-MDR is to pool 2-locus genotypes …
[HTML][HTML] Epigenome-wide association studies: current knowledge, strategies and recommendations
… , (2) there are many large-scale DNA banks of convenience … provides a powerful tool for
analysis of DNA methylation data … By pooling information from all CpGs limma moderates SE at …
analysis of DNA methylation data … By pooling information from all CpGs limma moderates SE at …
GWAS Central: a comprehensive resource for the discovery and comparison of genotype and phenotype data from genome-wide association studies
T Beck, T Shorter, AJ Brookes - Nucleic acids research, 2020 - academic.oup.com
… the data, for example, large-scale meta-analyses have suggested … of identifying individuals
from pooled sources of summary-… The website search tools enable results for single studies to …
from pooled sources of summary-… The website search tools enable results for single studies to …
Low-bias manipulation of DNA oligo pool for robust data storage
… large-scale DNA storage that requires amplification and sequencing of massive numbers of
DNA … Therefore, random access in a large-scale DNA oligo pool will be technically feasible …
DNA … Therefore, random access in a large-scale DNA oligo pool will be technically feasible …
Lessons from applied large-scale pooling of 133,816 SARS-CoV-2 RT-PCR tests
N Barak, R Ben-Ami, T Sido, A Perri… - Science Translational …, 2021 - science.org
… tools enabling efficient and rapid turnaround such as alerts, data analysis tools for the different
stages of pooling… PCR reaction roughly multiplies the amount of the targeted DNA in each …
stages of pooling… PCR reaction roughly multiplies the amount of the targeted DNA in each …
[HTML][HTML] DNA-based assessment of genetic diversity in grassland plant species: Challenges, approaches, and applications
M Loera-Sánchez, B Studer, R Kölliker - Agronomy, 2019 - mdpi.com
… perspectives on using large-scale genetic diversity monitoring to … bulked DNA approach also
known as Pool-Seq [97], in which the … the power of genome-wide association studies [148]. …
known as Pool-Seq [97], in which the … the power of genome-wide association studies [148]. …
Three assays for in-solution enrichment of ancient human DNA at more than a million SNPs
N Rohland, S Mallick, M Mah, R Maier… - … research, 2022 - genome.cshlp.org
… -wide association studies and that has been widely used in genome-wide studies of human
history. … Because the enriched ancient DNA libraries were sequenced in pools, we needed to …
history. … Because the enriched ancient DNA libraries were sequenced in pools, we needed to …
[HTML][HTML] Efficient mixed model approach for large-scale genome-wide association studies of ordinal categorical phenotypes
… In genome-wide association studies, ordinal categorical phenotypes are widely used to
measure human behaviors, satisfaction, and preferences. However, because of the lack of …
measure human behaviors, satisfaction, and preferences. However, because of the lack of …