Microhomologies are prevalent at Cas9-induced larger deletions
DDG Owens, A Caulder, V Frontera… - Nucleic acids …, 2019 - academic.oup.com
… Cas9 nuclease (derived from Streptococcus pyogenes) … ) polymerase chain reaction (PCR)
and Sanger sequencing (8,9). … examined what other factors might influence LD formation. At …
and Sanger sequencing (8,9). … examined what other factors might influence LD formation. At …
[HTML][HTML] Allele-specific chromosome removal after Cas9 cleavage in human embryos
MV Zuccaro, J Xu, C Mitchell, D Marin, R Zimmerman… - Cell, 2020 - cell.com
… for the mutant allele, we derived two embryonic stem cell (ESC) … Although this does not rule
out all deletions, deletions of a few … a translocation would affect two or more chromosomes. …
out all deletions, deletions of a few … a translocation would affect two or more chromosomes. …
Chromosome 22q11. 2 deletion syndrome and DiGeorge syndrome
KE Sullivan - Immunological Reviews, 2019 - Wiley Online Library
… of de novo deletions do not seem to have a major impact.51 … acid is a diffusible
mesenchymal-derived signal that influences … repertoire diminish the diversity of potential …
mesenchymal-derived signal that influences … repertoire diminish the diversity of potential …
[HTML][HTML] EDA, EDAR, EDARADD and WNT10A allelic variants in patients with ectodermal derivative impairment in the Spanish population
MC Martínez-Romero, MJ Ballesta-Martínez… - Orphanet Journal of …, 2019 - Springer
… result in less severe signs of HED and nearly normal sweating. In the patients with these
variants, the in-frame deletion … polymerase slippage but would not affect the multimerization and …
variants, the in-frame deletion … polymerase slippage but would not affect the multimerization and …
Radiotherapy is associated with a deletion signature that contributes to poor outcomes in patients with cancer
… We assessed the impact of RT and/or TMZ on the somatic … We evaluated whole-genome
sequencing-derived mutational … This work extends our knowledge on the genomic response …
sequencing-derived mutational … This work extends our knowledge on the genomic response …
[HTML][HTML] MACHETE identifies interferon-encompassing chromosome 9p21. 3 deletions as mediators of immune evasion and metastasis
… To dissect the mechanisms by which 4C4 deletions influence PDAC phenotypes, we performed
RNA-… Analysis of an experimentally derived type I IFN response signature (Methods and …
RNA-… Analysis of an experimentally derived type I IFN response signature (Methods and …
Immune evasion in HPV− head and neck precancer–cancer transition is driven by an aneuploid switch involving chromosome 9p loss
WN William Jr, X Zhao, JJ Bianchi… - Proceedings of the …, 2021 - National Acad Sciences
… suppression, but deletion of the entire arm was necessary to … evaluated CN influence on
immune profiles and outcomes in … response and resistance to immunotherapy include deletion …
immune profiles and outcomes in … response and resistance to immunotherapy include deletion …
Chromothripsis as an on-target consequence of CRISPR–Cas9 genome editing
… genome editing can cause local DNA rearrangements and deletions up to several … , we did
not detect LOH that would be suggestive of chromothripsis in hematopoietic colonies derived …
not detect LOH that would be suggestive of chromothripsis in hematopoietic colonies derived …
Whole genome paired-end sequencing elucidates functional and phenotypic consequences of balanced chromosomal rearrangement in patients with developmental …
…, L Faivre, B Gilbert-Dussardier, AM Guerrot… - Journal of Medical …, 2019 - jmg.bmj.com
… was defined by the presence of blunt ends, small deletions … breakpoint of derivative 1 and
to the breakpoint of derivative 14, … We then explored the general impact of breakpoints on the …
to the breakpoint of derivative 14, … We then explored the general impact of breakpoints on the …
Somatic genetic rescue in Mendelian haematopoietic diseases
P Revy, C Kannengiesser, A Fischer - Nature Reviews Genetics, 2019 - nature.com
… chromosome loss (that is, an interstitial or terminal deletion) … has consequences specific to
T cell fate and does not affect … and possibly antigen-specific responses 129 . In the context of …
T cell fate and does not affect … and possibly antigen-specific responses 129 . In the context of …