… a significant functional impact on gene expression. The high-… mediated by the CTCF protein
detected in a ChIA-PET … on the genome's mesoscale network structure. They also explain …

… In this article, most important computational methods for protein … ontology annotations and
gene expression profiles with those … information and/or network structure to detect conserved …

… data, we first accessed the normalized gene expression in the … entire network topology
propriety and perturbation data to … genes that participate big functional clusters are important for …

… integration of various gene expression data sets. Additionally… This package detects outlier
samples based on three quality … parameters that describe the network topology such as degree …

… type of data—either multiomics features or the network topology. … data, we found that the
sensitivity of EMOGI in detecting KCGs … , DNA methylation and gene expression data of 29,446 …

… GEO database was introduced for gene expression analysis … it contains 11 methods for
topological analysis [38]. The hub … of this study including hub gene detection for identifying drug …

… Also, we have identified crucial pathways, hub proteins, and … from JASPAR database based
on topological analysis using … We analyzed the gene expression microarray data from NCBI…

… The increasing abundance of gene expression data makes GCNs … Differential co-expression
analysis also detects differences … evolution, comparing network structure without relying on …

… genetic alterations correlated with tumorigenesis and progression is essential for identifying
new … .26, 27 Alterations of COL12A1 gene in chromosomal structure can cause its aberrant …

… We provided detail hub gene network structure in a Supplementary File, Additional file 7: …
hub genes detected by our method played an important role in the respective cancer. PAIP 2 …