RNA-seq analysis reveals transcriptome reprogramming and alternative splicing during early response to salt stress in tomato root

J Gan, Y Qiu, Y Tao, L Zhang, TW Okita… - Frontiers in Plant …, 2024 - frontiersin.org
… factors in regulation of salt response in plants, the salt-sensitive … The pattern of DNA methylation
alteration, and its association with … in date palm (Phoenix dactylifera L.). Front. Plant Sci. …

Variation in gene expression and DNA methylation in Scots pine (Pinus sylvestris L.) adaptation

E Alakärppä - 2023 - oulurepo.oulu.fi
origins under different light conditions. Secondly, variation in … have revealed that differentially
methylated regions (DMRs) … of genome-wide DNA methylation profiles. Genome Biology, 13…

Long non-coding RNAs of plants in response to abiotic stresses and their regulating roles in promoting environmental adaption

H Yang, Y Cui, Y Feng, Y Hu, L Liu, L Duan - Cells, 2023 - mdpi.com
… RNA-directed DNA methylation and regulating transposable … profiling results from Arabidopsis
root showed that only 25% … discovered in soybean in response to salinity stress [144]. …

CpG Methylation of the Proximal Promoter Region Regulates the Expression of NAC6D Gene in Response to High Temperature in Wheat (Triticum aestivum)

AM El-Shehawi, MA Elseehy, MM Elseehy - Cytology and Genetics, 2022 - Springer
… Close investigation of NAC6D promoter methylation revealedDNA methylation at these
sites is recruited by different types … Met3 showed opposite gene expression profile of NAC6D …

Whole-genome methylation analysis reveals epigenetic differences in the occurrence and recovery of hyperhydricity in Dendrobium officinale plantlets

H Zhang, M Shi, S Su, S Zheng, M Wang, J Lv… - In Vitro Cellular & …, 2022 - Springer
… that DNA methylation may indirectly regulate the transcription of … In short, DNA methylation
of tissue culture plantlets is prone to … It was consistent with the methylation profile. The GO …

… Methylome of the Medicinal Plant Catharanthus roseus Unravels the Tissue-Specific Control of the Monoterpene Indole Alkaloid Pathway by DNA Methylation

T Dugé de Bernonville, S Maury, A Delaunay… - International Journal of …, 2020 - mdpi.com
… whether variations in DNA methylation profiles may control … analysis revealed specific patterns
in differential methylation … as recently described in palm roots exposed to high salinity [52]. …

Differential Transgeneration Methylation of Exogenous Promoters in T1 Transgenic Wheat (Triticum aestivum)

MM Elseehy - Cytology and Genetics, 2020 - Springer
… gene expression by DNA methylation and their application in plant biotechnology. … roots
was associated with hypermethylation of these four CpG sites, where its high expression profile

How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis

A Vangelisti, LS Zambrano, G Caruso, D Macheda… - Scientific Reports, 2019 - nature.com
… At day 24, 224 transcripts were significantly up-regulated and 585 were down-regulated…
salinity 31 . Recent work showed that fig leaves remained healthy and green upon root exposure

Photosynthetic and cellular responses in plants under saline conditions

T Aftab - Frontiers in Plant–Soil Interaction: Molecular Insights …, 2021 - books.google.com
Differential responses to salinity can be seen in the same … root K+, Ca2+ Mg, and Fe decreased
in fenugreek subjectedDNA methylation was low in OsBZ8 locus of Nonabokra variety …

Epigenetic changes and transcriptional reprogramming upon woody plant grafting for crop sustainability in a changing environment

A Kapazoglou, E Tani, EV Avramidou… - Frontiers in plant …, 2021 - frontiersin.org
… a methylated TCPT transcript to root tissue had an effect on … Increased salinity in grapevine
cv. Thompson Seedless … revealed significant alterations in DNA methylation profiles between …