Selective sweeps under dominance and inbreeding
M Hartfield, T Bataillon - G3: Genes, Genomes, Genetics, 2020 - academic.oup.com
… , and propose methods to differentiate between scenarios. … We determine the genetic
diversity present following a sweep from either a de novo mutation, or from standing variation. We …
diversity present following a sweep from either a de novo mutation, or from standing variation. We …
Selective sweeps
W Stephan - Genetics, 2019 - academic.oup.com
… allele (eg, a new mutation) on linked neutral variation (driven by … in the standing variation
after an environment change. According to … or high differentiation between subpopulations. This …
after an environment change. According to … or high differentiation between subpopulations. This …
Sporadic occurrence of recent selective sweeps from standing variation in humans as revealed by an approximate Bayesian computation approach
… the sweeps from a de novo mutation ( p start = 1 / 2 N ) and from standing variation ( p
… our method is not able to distinguish between estimations obtained when the real number of …
… our method is not able to distinguish between estimations obtained when the real number of …
Identifying and classifying shared selective sweeps from multilocus data
AM Harris, M DeGiorgio - Genetics, 2020 - academic.oup.com
… the ability to distinguish between hard and soft shared sweeps by inferring the … selective
sweeps from a de novo mutation and soft sweeps from selection on standing genetic variation, …
sweeps from a de novo mutation and soft sweeps from selection on standing genetic variation, …
Landmarks in the history of selective sweeps
M Panigrahi, D Rajawat, SS Nayak, K Ghildiyal… - Animal …, 2023 - Wiley Online Library
… to differentiate between the cases of selective sweep and … boosting algorithms to distinguish
between positive selection … case of long- standing genetic variations and de novo mutations. …
between positive selection … case of long- standing genetic variations and de novo mutations. …
[PDF][PDF] The dynamics of adaptation to stress from standing genetic variation and de novo mutations
… by standing genetic variation despite high selective pressure. This … between standing genetic
variation and the influx of de novo mutations in populations adapting to a range of selective …
variation and the influx of de novo mutations in populations adapting to a range of selective …
Genetic signatures of evolutionary rescue by a selective sweep
… standing genetic variance, recurrent de novo mutation, or migration, and compare to selective
sweeps … difference between the effective and true initial allele frequencies). This causes …
sweeps … difference between the effective and true initial allele frequencies). This causes …
Parallel genetic evolution and speciation from standing variation
… adaptation from standing variation is affected by the difference in the direction of selection …
from standing variation are indeed more pleiotropic than alleles fixed from de novo mutation, …
from standing variation are indeed more pleiotropic than alleles fixed from de novo mutation, …
Fixation times of de novo and standing beneficial variants in subdivided populations
V Sudbrack, C Mullon - Genetics, 2024 - academic.oup.com
… of beneficial de novo mutations, as well as fixation time from standing genetic variation.
We … We define the genetic load as L=(1+s−z)/s, ie as the difference between the population …
We … We define the genetic load as L=(1+s−z)/s, ie as the difference between the population …
[PDF][PDF] A likelihood approach for uncovering selective sweep signatures from haplotype data
AM Harris, M DeGiorgio - Molecular biology and evolution, 2020 - academic.oup.com
… soft selective sweeps from selection on standing variation on … T statistic to differentiate between
neutrality and sweeps, we … We simulated selection on de novo mutations arising at times t …
neutrality and sweeps, we … We simulated selection on de novo mutations arising at times t …