Vertebrate chromosome evolution

J Damas, M Corbo, HA Lewin - Annual Review of Animal …, 2021 - annualreviews.org
… detailed whole-genome and multispecies comparative maps (eg, 67, … Fragmentation of
inferred ancestral chromosomes may be … for conceptualizing chromosome evolution is a dynamic

Evolution of the ancestral mammalian karyotype and syntenic regions

J Damas, M Corbo, J Kim… - Proceedings of the …, 2022 - National Acad Sciences
… An orthology map for each pairwise comparison is presented … functions in mammalian
multispecies homologous synteny … mammals, mistakenly inferred to be present in all mammals. …

A genomic timescale for placental mammal evolution

NM Foley, VC Mason, AJ Harris, KR Bredemeyer… - Science, 2023 - science.org
… also inferred phylogenies from thousands of noncoding loci distributed across chromosomes
… Although resolved recombination maps are lacking for most placental mammal species, the …

Comparative mapping of the macrochromosomes of eight avian species provides further insight into their phylogenetic relationships and avian karyotype evolution

LG Kiazim, RE O'Connor, DM Larkin, MN Romanov… - Cells, 2021 - mdpi.com
… An estimation of the neognath ancestral genome was inferred using the MLGO (Maximum …
Here, we use the same BAC set on multiple species, demonstrating proof of principle that …

Genomic architecture constrained placental mammal X Chromosome evolution

WA Brashear, KR Bredemeyer, WJ Murphy - Genome Research, 2021 - genome.cshlp.org
… In this study, we conducted a fine-scale multispecies comparison of placental mammal X …
Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. …

Dynamic evolution of great ape Y chromosomes

M Cechova, R Vegesna… - Proceedings of the …, 2020 - National Acad Sciences
… Furthermore, we inferred that the great ape common ancestor … count in the assemblies with
mapping read depth information from … Using our multispecies Y chromosome alignment, we …

[PDF][PDF] Computational Methods for Multi-Species Comparison of 3D Genome Organization and Function

Y Yang - 2020 - reports-archive.adm.cs.cmu.edu
… and dynamics for more than two mammalian species beyond … maps of RT initiation sites or
active RT origins in mammalian … to infer the underlying evolutionary patterns and predict the …

Mechanisms of rapid karyotype evolution in mammals

EO Brannan, GA Hartley, RJ O'Neill - Genes, 2023 - mdpi.com
chromosome maps across Artiodactyla revealed inversions and centromere repositioning
were key rearrangements during the dynamic evolution of the X chromosome [… mammals, with …

Analysis of muntjac deer genome and chromatin architecture reveals rapid karyotype evolution

AB Mudd, JV Bredeson, R Baum… - Communications …, 2020 - nature.com
… as a sub-chromosome assembly of Rangifer tarandus (reindeer) 21 to map karyotype changes
across … For the purposes of discussing chromosome dynamics across these species, it is …

The evolution of chromosome numbers: mechanistic models and experimental approaches

I Mayrose, MA Lysak - Genome biology and evolution, 2021 - academic.oup.com
… genome sequences of multiple species allow for a high-… Whole-chromosome comparative
cytogenomic maps, such as … and comparative genomics offer a powerful combination to infer