Integration of comprehensive genomic analysis and functional screening of affected molecular pathways to inform cancer therapy

G Vasmatzis, MC Liu, S Reganti, RW Feathers… - Mayo Clinic …, 2020 - Elsevier
… and to pinpoint the genes involved. The combination of MPseq … not incorporate comprehensive
proteomics, epigenomics, and … biallelic inactivation of numerous tumor suppressor genes

Remodeling the cancer epigenome: mutations in the SWI/SNF complex offer new therapeutic opportunities

KA Orlando, V Nguyen, JR Raab… - Expert review of …, 2019 - Taylor & Francis
… should follow a more coherent plan to pinpoint common vulnerabilities among these tumors.
… /SNF complexes to cancer arose from studies identifying biallelic inactivation of SMARCB1 …

Defining the Chromatin and Three Dimensional Genomic Landscape of Paediatric Brain Tumors

JJY Lee - 2022 - search.proquest.com
… possibility of epigenetic dysregulations driving these tumors. … to pinpoint specific gene(s)
that are likely targeted from these … ratio in tumor between [0.2, 0.8]; Thirdly, only biallelic sites …

[HTML][HTML] Pan-genomic characterization of high-risk pediatric papillary thyroid carcinoma

A Stenman, S Backman, K Johansson… - … -related cancer, 2021 - erc.bioscientifica.com
… given its role as an epigenetic regulator and a histone methylation … argue against a biallelic
type of mutational inactivation, which … As our WGS analysis did pinpoint important therapeutic …

In vivo functional screening for systems-level integrative cancer genomics

J Weber, CJ Braun, D Saur, R Rad - Nature reviews Cancer, 2020 - nature.com
… For example, mutated epigenetic regulators, transcription factors … data can pinpoint relevant
genes in such genomic regions, … of complexity, as biallelic gene inactivation is required. This …

[HTML][HTML] Causes, effects, and clinical implications of perturbed patterns within the cancer epigenome

U Oleksiewicz, M Machnik - Seminars in Cancer Biology, 2022 - Elsevier
… and within various tumors. Here… epigenomic landscape in cancer. We will focus mainly on
DNA methylation and post-translational histone modifications as the key regulatory epigenetic

[HTML][HTML] Advances in meningioma genomics, proteomics, and epigenetics: insights into biomarker identification and targeted therapies

AA Nazem, J Ruzevick, MJ Ferreira Jr - Oncotarget, 2020 - ncbi.nlm.nih.gov
genomic, proteomic, and epigenetic landscape, and discuss translational efforts to identify
patients at high risk of recurrence and tumors … in respective tumors while identical biallelic NF2 …

[HTML][HTML] Clinical genomic profiling in the management of patients with soft tissue and bone sarcoma

MM Gounder, NP Agaram, SE Trabucco… - Nature …, 2022 - nature.com
… -based therapeutics for these cancers. Prospective comprehensive genomic profiling could
… many sarcomas lack any specific gene signatures that can help pinpoint a specific subtype. …

[HTML][HTML] Leveraging genomics, transcriptomics and epigenomics to understand chemoimmunotherapy resistance in chronic lymphocytic leukemia

SY Ong, L Wang - Cancer Drug Resistance, 2024 - ncbi.nlm.nih.gov
… with 11q deletions, and biallelic ATM disruption led to … (NF-κB) signaling, and inactivation
or deletion of BIRC3 in CLL … CLL8 cohort allowed researchers to pinpoint patients with IGHV-…

Hallmark discoveries in the biology of Wilms tumour

D Perotti, RD Williams, J Wegert, J Brzezinski… - Nature Reviews …, 2024 - nature.com
Genomic imprinting is an epigenetic process that causes … genetic complexity, Knudson’s
two-hit model of inactivation of a … genomic sequences were used to pinpoint candidate genes. A …