Cotranscriptional RNA processing and modification in plants
… between RNA Polymerase II, IV, and V transcription and nascent RNA processing of both
coding and noncoding RNAs. … the competition between splicing and APA, a kinetic competition …
coding and noncoding RNAs. … the competition between splicing and APA, a kinetic competition …
KAP1 negatively regulates RNA polymerase II elongation kinetics to activate signal-induced transcription
… Kinetic competition 1041 between RNA Polymerase II and Sen1-dependent transcription
termination. Mol 1042 Cell 49, 55-66 (2013). https://doi.org:10.1016/j.molcel.2012.10.014 1043 …
termination. Mol 1042 Cell 49, 55-66 (2013). https://doi.org:10.1016/j.molcel.2012.10.014 1043 …
Native elongation transcript sequencing reveals temperature dependent dynamics of nascent RNAPII transcription in Arabidopsis
… -programming of the transcriptional output by RNA polymerase II (RNAPII) that … transcriptional
termination is determined by kinetic competition between the speed of RNAPII transcription …
termination is determined by kinetic competition between the speed of RNAPII transcription …
Single-molecule FRET method to investigate the dynamics of transcription elongation through the nucleosome by RNA polymerase II
… Data analysis for the kinetics of transcription elongation Upon obtaining FRET time
trajectories from individual ECs, we extract the kinetic rate constants of transcription elongation …
trajectories from individual ECs, we extract the kinetic rate constants of transcription elongation …
DSIF factor Spt5 coordinates transcription, maturation and exoribonucleolysis of RNA polymerase II transcripts.
K Kus, L Carrique, T Kecman, M Fournier… - bioRxiv, 2023 - biorxiv.org
… considered when assessing their effect on the RNA degradation kinetics of Xrn2. We …
U1 complex of the spliceosome104, which may indicate that there is a competition between …
U1 complex of the spliceosome104, which may indicate that there is a competition between …
[PDF][PDF] RNA Pol II cleavage activity is a major effector of transcription dynamics
RM Sheridan - 2019 - … .digitalcollections.cuanschutz.edu
… , transcription termination occurs at a position influenced by a kinetic competition between pol
II and termination factor … The mechanisms that influence the release of 5’ paused pol II and …
II and termination factor … The mechanisms that influence the release of 5’ paused pol II and …
[PDF][PDF] Sen1 and Rrm3 ensure permissive topological conditions for replication termination
R Choudhary, J Niska-Blakie, M Adhil, G Liberi… - Cell Reports, 2023 - cell.com
… , but not rrm3, builds up RNA polymerase II (RNPII) at TERs and telomeres. … We then analyzed
the kinetics of appearance and … Sen1dependent RNPII accumulation compared to rrm3D. …
the kinetics of appearance and … Sen1dependent RNPII accumulation compared to rrm3D. …
Yeast U6 snRNA made by RNA polymerase II is less stable but functional
… either the two U6 genes compete for transcription factors, … presumably transcribed by different
RNAPs, or that the RNAs compete … Thus, the rapid kinetics of glucose repression and U6-II …
RNAPs, or that the RNAs compete … Thus, the rapid kinetics of glucose repression and U6-II …
[HTML][HTML] Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing
… , during which nascent RNA is released from the complex of RNA Polymerase II (Pol … The
kinetic competition between Pol II and exonuclease promotes termination [1, 2, 16]. As a result, …
kinetic competition between Pol II and exonuclease promotes termination [1, 2, 16]. As a result, …
Distinct transcription kinetics of pluripotent cell states
R Shao, B Kumar, K Lidschreiber… - Molecular Systems …, 2022 - embopress.org
… RNA Pol II traverse encounters termination roadblocks imposed by DNA sequence or antisense
transcription … encounter stochastically determines if the polymerase comes to a complete …
transcription … encounter stochastically determines if the polymerase comes to a complete …