Global diversity of microbial communities in marine sediment

T Hoshino, H Doi, GI Uramoto… - Proceedings of the …, 2020 - National Acad Sciences
… Based on mathematical models of energy availability and microbial processes, the energy
required to simply survive, rather than to grow, comprises a substantial component of the total …

[HTML][HTML] Microbial assembly, interaction, functioning, activity and diversification: a review derived from community compositional data

J Liu, Z Meng, X Liu, XH Zhang - Marine Life Science & Technology, 2019 - Springer
… in studies on marine microbial community composition using high-… exciting new insights
into marine microbial ecology from a … Nevertheless, these models cannot distinguish different

Ecological modelling approaches for predicting emergent properties in microbial communities

NI van den Berg, D Machado, S Santos… - Nature ecology & …, 2022 - nature.com
… Trait-based models allow community members to not only respond to, but also influence, …
-based models can be applied to larger microbial communities like those in ocean systems 114,…

Interactions in self-assembled microbial communities saturate with diversity

X Yu, MF Polz, EJ Alm - The ISME journal, 2019 - academic.oup.com
community members in monoculture, many community interaction models are most suitable
for systems in which diversity … contained a fixed standard marine bacteria mixture containing …

Impacts of global warming on marine microbial communities

B Abirami, M Radhakrishnan, S Kumaran… - Science of The Total …, 2021 - Elsevier
… Genomics plays an important role in marine microbial research by providing tools to study
the … perspectives of marine microbes are being investigated to design effective models to …

[HTML][HTML] Marine biofilms constitute a bank of hidden microbial diversity and functional potential

W Zhang, W Ding, YX Li, C Tam, S Bougouffa… - Nature …, 2019 - nature.com
ocean microbial diversity, and allow mining novel microbial lineages and gene resources. …
Clustering of the BCGC protein domains based on hidden Markov models (HMM) classified …

[HTML][HTML] Macroecological laws describe variation and diversity in microbial communities

J Grilli - Nature communications, 2020 - nature.com
… This paper contributes in filling the gap between mechanistic models and macroscopic
patterns, by disentangling different sources of variation of species abundance. We showed that …

[HTML][HTML] Modular assembly of polysaccharide-degrading marine microbial communities

TN Enke, MS Datta, J Schwartzman, N Cermak… - Current Biology, 2019 - cell.com
… Taken together, our results suggest that at the level of functional groups, microbial
communities have a simple trophic structure that allows functionally complex communities to be …

The structure and assembly mechanisms of plastisphere microbial community in natural marine environment

SJ Zhang, YH Zeng, JM Zhu, ZH Cai, J Zhou - Journal of Hazardous …, 2022 - Elsevier
… attach rather than selectively recruiting plastic-specific microbial colonizers. Our work …
microbial community patterns are controlled during colonization by plastic-associated microbes. …

[HTML][HTML] A minimal model for microbial biodiversity can reproduce experimentally observed ecological patterns

R Marsland III, W Cui, P Mehta - Scientific reports, 2020 - nature.com
… 5, the Fisher log series also gives a good fit to species abundance data on ocean microbial
communities from the Tara Oceans dataset 20 . Simulation data generated using the MiCRM …