Non-coding RNAs and transposable elements in plant genomes: emergence, regulatory mechanisms and roles in plant development and stress responses

J Hou, D Lu, AS Mason, B Li, M Xiao, S An, D Fu - Planta, 2019 - Springer
stresses, as well as their evolutionary role in facilitating plant … within a host genome, or by
horizontal gene transfer. Active … host gene in plants, but instead provide new biological insights …

Environmental stress and transposons in plants

H Ito - Genes & Genetic Systems, 2022 - jstage.jst.go.jp
… between cells but only move around the genome in a single … which transposons are activated
by environmental stresses in … between stress-responsive transposons and the host genome

The dynamism of transposon methylation for plant development and stress adaptation

M Ramakrishnan, L Satish, R Kalendar… - International Journal of …, 2021 - mdpi.com
stresses. In recent years, many studies have shown that TE methylation plays a major role in
the evolution of the plant genome through … strands and do not move via an RNA intermediate…

Nearby transposable elements impact plant stress gene regulatory networks: a meta-analysis in A. thaliana and S. lycopersicum

J Deneweth, Y Van de Peer, V Vermeirssen - BMC genomics, 2022 - Springer
… two contrasting plant species to study the regulatory role TEs … gene regulation allows plants
to adapt more rapidly to new … of quiescent TEs upon plant abiotic and biotic stresses is well …

Stress, adaptation, and the deep genome: why transposons matter

RG Hunter - Integrative and Comparative Biology, 2020 - academic.oup.com
… Recent work on the regulation of transposable elements (TEs… to flee the host when the host
is stressed or moribund. For non-… otic genomes for the ubiquitous horizontal gene transfer

Retrotransposons: How the continuous evolutionary front shapes plant genomes for response to heat stress

PK Papolu, M Ramakrishnan, S Mullasseri… - Frontiers in plant …, 2022 - frontiersin.org
… to increase resistance to heat stresses due to global warming. … methyltransferase gene
OsDRM2, indicating that transposon-… This is because TEs can move. Therefore, TEs, especially …

Genomic impact of stress-induced transposable element mobility in Arabidopsis

D Roquis, M Robertson, L Yu, M Thieme… - Nucleic acids …, 2021 - academic.oup.com
… novel gene regulatory pathways responding to stresses and … F1 qPCR ranged from 3
to 99 new insertions), as well as two … modifications going far beyond knockouts and stress

Moving beyond DNA sequence to improve plant stress responses

F Saeed, UK Chaudhry, A Bakhsh, A Raza… - Frontiers in …, 2022 - frontiersin.org
… The miniature inverted-repeat transposable element (MITE) … plants often deal with multiple
stresses at one time. With the rapid advances in genome-wide methylation profiling and gene

On the role of transposable elements in the regulation of gene expression and subgenomic interactions in crop genomes

RA Gill, F Scossa, GJ King, AA Golicz… - … Reviews in Plant …, 2021 - Taylor & Francis
… of polyploid plant evolution and environmental stress, and … Evolution of new phenotypes
such as the ability to adapt to … pressure in crop plants) helped plants move from tropical and/or …

Transposable elements and stress in vertebrates: An overview

AM Pappalardo, V Ferrito, MA Biscotti… - International Journal of …, 2021 - mdpi.com
… and exposition to environmental stresses and dietary factors. In … to move and insert into
various host genomic positions is called … genomes may hold a higher proportion of transposable