Whole‐Genome Sequence of Synthesized Allopolyploids in Cucumis Reveals Insights into the Genome Evolution of Allopolyploidization

X Yu, P Wang, J Li, Q Zhao, C Ji, Z Zhu… - Advanced …, 2021 - Wiley Online Library
… the next generation. … genome sequencing using SMRT sequencing technology (Pacific
Biosciences). The original F 1 homoploid hybrid, S 0 , and one individual from each generation

Next generation DNA sequencing reveals allopolyploid origin of decaploid Isoëtes lacustris (Isoëtaceae)

MY Grigoryan, AA Bobrov, DF Brunton, PA Volkova… - Aquatic Botany, 2021 - Elsevier
Next generation sequencing of the second intron of LEAFY indicates that decaploid Isoëtes
lacustris is an allopolyploid having in its genome the subgenomes of the North American …

Homoeologous exchanges, segmental allopolyploidy, and polyploid genome evolution

AS Mason, JF Wendel - Frontiers in Genetics, 2020 - frontiersin.org
… of autopolyploid and allopolyploid segments, sometimes termed “segmental allopolyploids.”
… of the relationship between genome instability in novel polyploids and genome evolution. …

Gradual evolution of allopolyploidy in Arabidopsis suecica

R Burns, T Mandáková, J Gunis… - … Ecology & Evolution, 2021 - nature.com
… examples resemble resynthesized allopolyploids in being … allopolyploids generally do
not show signs of genomic changes 12,13,14,16,69,70,71 . Here, we focus on an allopolyploid

Genome evolution in Oryza allopolyploids of various ages: Insights into the process of diploidization

X Zou, Y Du, X Wang, Q Wang, B Zhang… - The Plant …, 2021 - Wiley Online Library
… , genome dominance was not observed and its short-term responses to allopolyploidy are
… insights into our understanding of genome evolution after allopolyploidy, and could facilitate …

Characterization and acceleration of genome shuffling and ploidy reduction in synthetic allopolyploids by genome sequencing and editing

X Zhang, S Zhang, Z Liu, W Zhao, X Zhang… - Nucleic Acids …, 2023 - academic.oup.com
… ploidy reduction and genome shuffling are the major driving forces of genome evolution.
Here, we revealed short-term allopolyploid genome evolution by sequencing a synthetic …

Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering

T Mandáková, M Pouch, JR Brock, IA Al-Shehbaz… - The Plant …, 2019 - academic.oup.com
… -throughput whole-genome sequencing of these and other diploid and polyploid genomes
has greatly advanced our understanding of post-polyploid genome evolution. Despite recent …

Transposon signatures of allopolyploid genome evolution

AM Session, DS Rokhsar - Nature Communications, 2023 - nature.com
… within allopolyploid genomes that relies on transposable elements to group chromosomes
into sets with shared ancestry, without regard to any external genome comparisons. This …

Phylogenetic analysis of allotetraploid species using polarized genomic sequences

JL Leal, P Milesi, J Salojärvi, M Lascoux - Systematic Biology, 2023 - academic.oup.com
… of genomic polarization that, when applied to an allopolyploid species, produces nucleotide
sequences that capture the fraction of a polyploid genome … ) to the second parental species. …

[HTML][HTML] Allopolyploid subgenome identification and implications for evolutionary analysis

AM Session - Trends in Genetics, 2024 - cell.com
… to identify the ancestors of allopolyploid subgenomes, discuss the … affect the subsequent
evolutionary analysis of these genomes. … in genome evolution to further our understanding of …