Bridging the brain and data sciences

JD Van Horn - Big Data, 2021 - liebertpub.com
… model, large-scale brain and data science is here to stay. … , the NIH BRAIN Initiative, 1 Human
Connectome Project (… , the large scale network models and optimization or exploration of …

Mapping brain-wide excitatory projectome of primate prefrontal cortex at submicron resolution and comparison with diffusion tractography

M Yan, W Yu, Q Lv, Q Lv, T Bo, X Chen, Y Liu, Y Zhan… - Elife, 2022 - elifesciences.org
… , tissue labeling, large- scale microscopy, and computational … for hosting such big connectome
data. Therefore we host it … global optimisation method for robust affine registration of brain

[HTML][HTML] Diffusion tensor imaging-based studies at the group-level applied to animal models of neurodegenerative diseases

HP Müller, F Roselli, V Rasche… - Frontiers in neuroscience, 2020 - frontiersin.org
… identify DTI as a key approach to investigate large-scale and … There is a growing number
of large-scale connectomes for … At the same time, single-neuron resolution connectomes are …

Characterization of regional differences in resting-state fMRI with a data-driven network model of brain dynamics

V Sip, M Hashemi, T Dickscheid, K Amunts… - Science …, 2023 - science.org
… a neural mass at each node of a large-scale brain network? … -state fMRI data of 100 subjects
from the Human Connectome … do not optimize their parameters directly but through encoder …

Brain virtual histology with X-ray phase-contrast tomography Part I: whole-brain myelin mapping in white-matter injury models

M Chourrout, H Rositi, E Ong, V Hubert… - Biomedical optics …, 2022 - opg.optica.org
… tensor imaging (DTI), we retrieved fiber directions and DTI-like … optimized approach to map
myelin fibers in the whole mouse … Another potential application of connectome mapping by …

[HTML][HTML] Whole-brain optical imaging: A powerful tool for precise brain mapping at the mesoscopic level

T Jiang, H Gong, J Yuan - Neuroscience Bulletin, 2023 - Springer
… fMRI), and diffusion tensor imaging (DTI) have vastly increased our … neuronal mapping of the
whole mouse brain is not possible. … rate limits the continuous tracing of axons and dendrites. …

Towards reliable reconstruction of the mouse brain thalamocortical connectivity using diffusion MRI

TM Arefin, CH Lee, Z Liang, H Rallapalli, YZ Wadghiri… - bioRxiv, 2022 - biorxiv.org
… Hence, in this study, we aimed to optimize the imaging and … assessment of structural
connectome of the mouse brain that … the possibility of seeking neural connections within largely …

[HTML][HTML] Distinct structure-function relationships across cortical regions and connectivity scales in the rat brain

M Straathof, MRT Sinke, TJM Roelofs, ELA Blezer… - Scientific reports, 2020 - nature.com
… the structure-function connectome of the rat brain (c) (circles … This heightened the reliability
of our assessment of the … from diffusion MRI or neuronal tracing, influences measurements of …

Mtneuro: A benchmark for evaluating representations of brain structure across multiple levels of abstraction

J Quesada, L Sathidevi, R Liu, N Ahad… - Advances in neural …, 2022 - proceedings.neurips.cc
… in MRI and related modalities like DTI and fMRI. For example, the … established for estimation
of functional traces from two-photon … These data, however, are not suitable for large-scale

Cross-hemispheric communication: Insights on lateralized brain functions

S Ocklenburg, ZV Guo - Neuron, 2024 - cell.com
Using this optimized protocol, unilateral inhibition of the premotor cortex … Large-scale,
multi-regional recording of neural activity … (DTI) study in 138 small and large human brains found a …