Whole-brain optical imaging: A powerful tool for precise brain mapping at the mesoscopic level

T Jiang, H Gong, J Yuan - Neuroscience Bulletin, 2023 - Springer
… fMRI), and diffusion tensor imaging (DTI) have vastly increased our … neuronal mapping of the
whole mouse brain is not possible. … rate limits the continuous tracing of axons and dendrites. …

[PDF][PDF] Analysis of Cortical Connectomes

A Motta - 2023 - research-collection.ethz.ch
… for the analysis of neuron-to-neuron connectomes of local cortical … in human compared to
mouse cerebral cortex was found to be … In the following, we will first review current data rates in …

Dynamical differential covariance recovers directional network structure in multiscale neural systems

Y Chen, BQ Rosen… - Proceedings of the …, 2022 - National Acad Sciences
… Methods for analyzing these large-scale recordings are … ) connectome (31) and the diffusion
tensor imaging (DTI) … equations that govern neural interactions, no optimization or model …

[PDF][PDF] Diffusion MRI tractography for oncological neurosurgery planning: Clinical research prototype

D Krahulec - 2023 - research.tue.nl
… -oriented research that is performed to optimize (accelerate … A DTI acquisition is relatively
fast (whole brain coverage … 842 subjects’ dMRI data in the Human Connectome Project. All MRI …

[HTML][HTML] QuNex—An integrative platform for reproducible neuroimaging analytics

JL Ji, J Demšar, C Fonteneau, Z Tamayo… - Frontiers in …, 2023 - frontiersin.org
… for a number of common dMRI analyses including diffusion tensor imaging (DTI) and …
handling large-scale datasets, while providing great flexibility and user friendliness in optimization

Diffusion tensor imaging-based studies at the group-level applied to animal models of neurodegenerative diseases

HP Müller, F Roselli, V Rasche… - Frontiers in neuroscience, 2020 - frontiersin.org
… identify DTI as a key approach to investigate large-scale and … There is a growing number
of large-scale connectomes for … At the same time, single-neuron resolution connectomes are …

Integrating Histology and Microarchitecture Modeling with Deep Learning for Diffusion-Weighted Magnetic Resonance Imaging

V Nath - 2020 - ir.vanderbilt.edu
… fiber population and its corresponding DTI model vs HARDI fiber … which shows the neural
pathways of an invivo brain on the … using single subject large scale in-vivo acquired data. The …

[HTML][HTML] A registration method for improving quantitative assessment in probabilistic diffusion tractography

JL Waugh, JK Kuster, ML Makhlouf, JM Levenstein… - NeuroImage, 2019 - Elsevier
… , and the difficulty in optimizing diffusion imaging and … is variable between subjects, such
large-scale registration will fail to … acquired using a high-resolution whole brain DTI sequence …

Mtneuro: A benchmark for evaluating representations of brain structure across multiple levels of abstraction

J Quesada, L Sathidevi, R Liu, N Ahad… - Advances in neural …, 2022 - proceedings.neurips.cc
… in MRI and related modalities like DTI and fMRI. For example, the … established for estimation
of functional traces from two-photon … These data, however, are not suitable for large-scale

[PDF][PDF] Computational synthesis of cortical dendritic morphologies

L Kanari, H Dictus, A Chalimourda, A Arnaudon… - Cell Reports, 2022 - cell.com
… electrical behavior of neurons, the connectomes they form, … branching properties to the
structure of large-scale networks. … with the reference trace for the optimized model (black). Step …