Estimating brain connectivity with diffusion-weighted magnetic resonance imaging: promise and peril

MD Grier, J Zimmermann, SR Heilbronner - … : Cognitive Neuroscience and …, 2020 - Elsevier
… In this review, we are particularly interested in how dMRI data are used to model neuronal
… This suggests that subject- or tract-specific optimization may dramatically improve accuracy. …

A systematic review on the quantitative relationship between structural and functional network connectivity strength in mammalian brains

M Straathof, MRT Sinke… - Journal of Cerebral …, 2019 - journals.sagepub.com
… are taken up by neurons and axonally transported, allowing assessment of the location, …
2014 Large-scale topology and the default mode network in the mouse connectome. PNAS …

Discovering hierarchical common brain networks via multimodal deep belief network

S Zhang, Q Dong, W Zhang, H Huang, D Zhu… - Medical image analysis, 2019 - Elsevier
… will thus take the advantage of large-scale training samples. For example… For comparison,
the same inputs will be firstly optimized by … DBN is a hierarchical neural network that can learn …

Early adversity changes the economic conditions of structural brain network organisation

S Carozza, J Holmes, PE Vértes, E Bullmore, TM Arefin… - BioRxiv, 2022 - biorxiv.org
neural processes through which early adversity exerts these effects remain largely unknown.
We used generative network modelling of the mouse connectome … used to optimise model …

[HTML][HTML] Connectomic mapping of brain-spinal cord neural networks: future directions in assessing spinal cord injury at rest

L Zhang, L Wang, H Xia, Y Tan, C Li, C Fang - Neuroscience Research, 2022 - Elsevier
… analysis looking at large-scale neural networks. This have … at the lower level is not as
optimized as at the cervical level (… Adding diffusion tensor imaging (DTI) to simultaneous fMRI or …

[HTML][HTML] Cytoarchitecture of the mouse brain by high resolution diffusion magnetic resonance imaging

N Wang, LE White, Y Qi, G Cofer, GA Johnson - Neuroimage, 2020 - Elsevier
… The goal of this present work is to optimize MRH methods for … are dense with small stellate
neurons, interneurons, and glia … In vivo human brain DTI at submillimeter isotropic resolution (…

[HTML][HTML] Structurally constrained effective brain connectivity

A Crimi, L Dodero, F Sambataro, V Murino, D Sona - NeuroImage, 2021 - Elsevier
… or regulatory pathways within neurons to the interactions between … the connectome, the
graph nodes were determined using the … We optimized the weights for the direct and indirect …

[HTML][HTML] The role of spatial embedding in mouse brain networks constructed from diffusion tractography and tracer injections

S Trinkle, S Foxley, G Wildenberg, N Kasthuri… - Neuroimage, 2021 - Elsevier
… data in mice and neural tracer data from the Allen Mouse Brain … the true mesoscale connectome
of the mouse brain. Furthermore, … of each brain graph was determined by optimizing the …

Mtneuro: A benchmark for evaluating representations of brain structure across multiple levels of abstraction

J Quesada, L Sathidevi, R Liu, N Ahad… - Advances in neural …, 2022 - proceedings.neurips.cc
… in MRI and related modalities like DTI and fMRI. For example, … -resolution sections from the
mouse brain with Nissl contrast (39), … tools for emerging large-scale neuroimaging datasets. …

[HTML][HTML] Mapping functional brain networks from the structural connectome: Relating the series expansion and eigenmode approaches

P Tewarie, B Prasse, JM Meier, FAN Santos, L Douw… - NeuroImage, 2020 - Elsevier
… Also approaches using coupled neural … (DTI) and resting-state functional Magnetic
Resonance Imaging (fMRI). We subsequently analyse both approaches in terms of an optimization