Lung function and microbiota diversity in cystic fibrosis

L Cuthbertson, AW Walker, AE Oliver, GB Rogers… - Microbiome, 2020 - Springer
… into either common and abundant core taxa or rarer and infrequent satellite taxa, based upon
Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities. …

Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways

S Widder, J Zhao, LA Carmody, Q Zhang… - The ISME …, 2022 - academic.oup.com
… Airway bacterial communities were partitionedpartitioned the 818 samples and the bacterial
communities therein into eight pulmotypes based on the 50 most abundant bacterial taxa (…

Deciphering the ecology of cystic fibrosis bacterial communities: towards systems-level integration

A Bevivino, G Bacci, P Drevinek, MT Nelson… - Trends in molecular …, 2019 - cell.com
… facilitated the distinction of common CF respiratory microbes from uncommon ones (ie, core
and … Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities. …

Mild cystic fibrosis lung disease is associated with bacterial community stability

TH Hampton, D Thomas, C van der Gast… - Microbiology …, 2021 - Am Soc Microbiol
… Our results suggest that bacterial community instability may be a risk factor for lung function
Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities. 5. …

The microbiome in cystic fibrosis pulmonary disease

A Françoise, G Héry-Arnaud - Genes, 2020 - mdpi.com
… has enabled very exhaustive description of bacterial communities in the CF lung niche and,
to a … High-throughput 16S rRNA gene sequencing highlighted a "core microbiome" of taxa

[HTML][HTML] Intestinal function and transit associate with gut microbiota dysbiosis in cystic fibrosis

R Marsh, H Gavillet, L Hanson, C Ng… - … of Cystic Fibrosis, 2022 - Elsevier
… Demonstrated previously for CF lung and Crohn's gut microbiota [26,27], we have … and
bacterial dysbiosis in the CF population. By partitioning the community into core and satellite taxa, …

Ecological succession of polymicrobial communities in the cystic fibrosis airways

RA Khanolkar, ST Clark, PW Wang, DM Hwang… - Msystems, 2020 - Am Soc Microbiol
… Here, we aim to describe the temporal succession of the CF lung microbial communities
and … Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities. …

Community analysis and co-occurrence patterns in airway microbial communities during health and disease

GG Einarsson, J Zhao, JJ LiPuma… - ERJ open …, 2019 - Eur Respiratory Soc
… the broader microbial community structures within the airways, … various taxa in health and/or
disease communities. Through … Partitioning core and satellite taxa from within cystic fibrosis

Metabolic modeling of cystic fibrosis airway communities predicts mechanisms of pathogen dominance

MA Henson, G Orazi, P Phalak, GA O'Toole - MSystems, 2019 - Am Soc Microbiol
… between the CF lung environment and the infecting microbial community, we developed
a … Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities. …

[HTML][HTML] Impact of extended Elexacaftor/Tezacaftor/Ivacaftor therapy on the gut microbiome in cystic fibrosis

R Marsh, C Dos Santos, A Yule, NS Dellschaft… - … of Cystic Fibrosis, 2024 - Elsevier
… ) were utilised for microbial partitioning into common core and rarer satellite groups, and were
… of the bacterial community across all partitions, second only to age within the satellite taxa