RNAcentral 2021: secondary structure integration, improved sequence search and new member databases

Nucleic acids research, 2021 - academic.oup.com
… The RNAcentral database continues to grow and provide a central data resource for the …
the majority of sequences in RNAcentral, we set out to develop a new method for producing 2D …

Database resources of the national genomics data center, China national center for bioinformation in 2022

Nucleic Acids Research, 2022 - academic.oup.com
… , detailed in (15) in this issue) is a comprehensive database collecting and standardizing
experimental data generated in regeneration research. In the current version, Regeneration …

[HTML][HTML] Database resources of the National Center for Biotechnology Information in 2023

EW Sayers, EE Bolton, JR Brister, K Canese… - … acids research, 2023 - ncbi.nlm.nih.gov
… for molecular biology (1). In this article we provide a brief overview of the NCBI collection of
databases… integrity and style errors to users so they can fix these issues themselves, allowing …

UniProt: the universal protein knowledgebase in 2023

Nucleic acids research, 2023 - academic.oup.com
… In this publication we describe enhancements made to our data processing pipeline and to
… that a uniform set of protein sequences is available across multiple databases, aiding users …

MODOMICS: a database of RNA modification pathways. 2021 update

P Boccaletto, F Stefaniak, A Ray… - … acids research, 2022 - academic.oup.com
… are the RCSB Protein Data Bank database (links to structures… Database (26), PubChem (the
world's largest collection of … (a manually curated database of bioactive molecules with drug-…

Database resources of the national genomics data center, China national center for bioinformation in 2023

Nucleic acids research, 2023 - academic.oup.com
… for databases published in the NAR Database Issue. … data collection for a wide range of
species and accepts data … diseases and 17 human molecular biological models. In addition …

The conserved domain database in 2023

J Wang, F Chitsaz, MK Derbyshire… - … Acids Research, 2023 - academic.oup.com
… The major focus of ongoing work at CDD is to ensure sustainability of the data flow and public
services. We strive to keep up with the growth of the sequence collections and to provide a …

Rhea, the reaction knowledgebase in 2022

P Bansal, A Morgat, KB Axelsen… - … acids research, 2022 - academic.oup.com
… our last report in the database issue of Nucleic Acids Research in 2019. … Rhea reaction data
is widely used for the annotation of … Users can apply additional constraints to the result set by …

GenBank 2023 update

EW Sayers, M Cavanaugh, K Clark… - … acids research, 2023 - academic.oup.com
… as doing so maximizes free data access, both through the INSDC databases but also through
the … We continue to collect the latest data and resources related to SARS-CoV-2 on a single …

PubChem 2023 update

S Kim, J Chen, T Cheng, A Gindulyte, J He… - … acids research, 2023 - academic.oup.com
… PubChem Patent data collection; the creation of the Cell Line and Taxonomy data collections,
… those published in the Nucleic Acid Research Database issues (1,19,21) and Webserver …