Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing

CE Grover, MA Arick, A Thrash… - Genome Biology and …, 2019 - academic.oup.com
… total 880 Mb genome, but most transposable element families are relatively old and stable
… The close relationship of Houzingenia species to the agronomically important polyploid

Evolutionary dynamics of transposable elements and satellite DNAs in polyploid Spartina species

D Giraud, O Lima, V Huteau, O Coriton, J Boutte… - Plant science, 2021 - Elsevier
transposons (or Class II elements) replicate via a “cut-paste” process [[15], [16], [17]].
Transposable elements may … Transposable elements not only shape genome structure, but can …

[PDF][PDF] Genome size variation in cotton

Y Zhang, G Hu, CE Grover - Cotton: Some Insights - researchgate.net
… in Gossypium highlighted transposable elements as key players in the genome size differences
among species, along with the propensity of smallgenome cotton … and polyploid species, …

Preferential insertion of a Ty1 LTR-retrotransposon into the A sub-genome's HD1 gene significantly correlated with the reduction in stem trichomes of tetraploid cotton

M Tang, X Wu, Y Cao, Y Qin, M Ding, Y Jiang… - Molecular Genetics and …, 2020 - Springer
Gossypium barbadense, two insertions of a Ty1 long-terminal repeat-retrotransposon [transposable
element … that the TE occurred after tetraploid cotton formation and evolved at different …

One subgenome to rule them all: underlying mechanisms of subgenome dominance

EI Alger, PP Edger - Current opinion in plant biology, 2020 - Elsevier
… Low transposable element (TE) abundance near genes has … This is further supported by
work in cotton, where subgenome … was an auto-polyploid or allo-polyploid event between two …

Polyploidy, the nucleotype, and novelty: the impact of genome doubling on the biology of the cell

JJ Doyle, JE Coate - International Journal of Plant Sciences, 2019 - journals.uchicago.edu
… Thus, P limitation could constrain the size of total RNA transcriptomes in polyploids, explaining
the observation that polyploid transcriptomes tend to be partially dosage compensated. …

Screening diversity and distribution of Copia retrotransposons reveals a specific amplification of BARE1 elements in genomes of the polyploid Hordeum murinum …

M Ourari, O Coriton, G Martin, V Huteau, J Keller… - Genetica, 2020 - Springer
Transposable elements represent an important and dynamic component of plant genomes
(… The most important group of transposable elements (TE) is composed of Long Terminal …

[PDF][PDF] Identification and functional characterization of a fuzzless gene in Gossypium arboreum

X Feng - 2022 - orbi.uliege.be
cotton and support gene resources to facilitate the cotton … 1) In the first part, the fuzzless gene
in diploid cotton DPL972 … sequence polymorphisms between two cotton lines. It encoded a …

Cotton (Gossypium species) production systems of India: Historical perspective, achievements and challenges

D Blaise - Indian Journal of Agronomy, 2021 - indianjournals.com
… hybridization, polyploidy, and selection over a period of time in nature. The cotton gene … In
such a situation, the on-farm wastes, presently treated as a waste is disposed of by burning. As …

Meiosis in polyploids and implications for genetic mapping: a review

NR Soares, M Mollinari, GK Oliveira, GS Pereira… - Genes, 2021 - mdpi.com
… Interestingly, it has been proposed that a subgenome with a higher number of transposable
elements is more likely to be lost in allopolyploids as a result of biased genome fractionation […