Whole mouse brain connectomics

G Allan Johnson, N Wang, RJ Anderson… - Journal of …, 2019 - Wiley Online Library
… improvement of dMRI connectomics. We believe that whole brain connectomics using dMRI
… and neuronal connectivity of the mammalian brain. When carefully executed, with a clear …

Network structure of the mouse brain connectome with voxel resolution

L Coletta, M Pagani, JD Whitesell, JA Harris… - Science …, 2020 - science.org
… This resource entails an improved interpolation model for single tracer injection maps
and provides whole-brain coverage, encompassing subcortical districts not covered by state-of-the-…

FlyWire: online community for whole-brain connectomics

S Dorkenwald, CE McKellar, T Macrina, N Kemnitz… - Nature …, 2022 - nature.com
… of neurons across the whole brain. It is likely that each whole-brain connectome will require
… We propose that whole-brain connectomics for each animal species could benefit from a …

[HTML][HTML] A Scalable Staining Strategy for Whole-Brain Connectomics

X Lu, Y Wu, RL Schalek, Y Meirovitch, DR Berger… - bioRxiv, 2023 - ncbi.nlm.nih.gov
… of increasingly larger connectomic projects, especially the whole mouse brain project, we
developed ODeCO, a procedure that is able to stain and embed whole mouse brains for EM …

Merged magnetic resonance and light sheet microscopy of the whole mouse brain

GA Johnson, Y Tian, DG Ashbrook… - Proceedings of the …, 2023 - National Acad Sciences
… Throughput is sufficiently high that HiDiver is being used in quantitative studies of the
impact of gene variants and aging on mouse brain cytoarchitecture and connectomics. …

Individual structural features constrain the mouse functional connectome

F Melozzi, E Bergmann, JA Harris… - Proceedings of the …, 2019 - National Acad Sciences
… that hemispherical lateralization in the mouse connectome influences whole brain dynamics.
… Progress in connectomics enabled the development of large-scale brain models to study …

Comparative prospects of imaging methods for whole-brain mammalian connectomics

LT Collins, R Koene - arXiv preprint arXiv:2405.10488, 2024 - arxiv.org
whole-brain mammalian connectomics, especially in the context of expanded samples.(Small
FOV vastly slows imaging due to volumetric scaling). In another highly publicized advance…

A null model of the mouse whole-neocortex micro-connectome

MW Reimann, M Gevaert, Y Shi, H Lu… - Nature …, 2019 - nature.com
connectomics to build a first draft statistical model of the micro-connectome of a whole
mouse … -to-region connectivity and individual whole-brain axon reconstructions. This process …

[HTML][HTML] Variability and heritability of mouse brain structure: Microscopic MRI atlases and connectomes for diverse strains

N Wang, RJ Anderson, DG Ashbrook… - Neuroimage, 2020 - Elsevier
whole brain structural MRI and diffusion connectomes for four diverse isogenic lines of mice
(… Routine rodent brain connectomics is challenging because of the simultaneous demands of …

Macroscopic structural and connectome mapping of the mouse brain using diffusion magnetic resonance imaging

TM Arefin, CH Lee, JD White, J Zhang, A Kaffman - Bio-protocol, 2021 - bio-protocol.org
… entire mouse brain at an isotropic resolution of 100 µm. We first used unbiased whole-brain
voxel-… in the brain of adult mice exposed to unpredictable postnatal stress (UPS), which is a …