Changes in DNA Methylation in Arabidopsis thaliana Plants Exposed Over Multiple Generations to Gamma Radiation
…, S Voorspoels, G Jacobs, A Cuypers… - Frontiers in Plant …, 2021 - frontiersin.org
… radiation on DNA methylation and its effect across generations in young Arabidopsis plants.
… generation 2) of 7-day old Arabidopsis thaliana plants were exposed to either of the different …
… generation 2) of 7-day old Arabidopsis thaliana plants were exposed to either of the different …
Active DNA demethylation in plants
JT Parrilla-Doblas, T Roldán-Arjona, RR Ariza… - International journal of …, 2019 - mdpi.com
… DNA glycosylases, the plant DNA demethylation pathway involves a variety of enzymes
processing the successive DNA demethylation … The Arabidopsis genome encodes three DNA …
processing the successive DNA demethylation … The Arabidopsis genome encodes three DNA …
DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and development
L He, H Huang, M Bradai, C Zhao, Y You, J Ma… - Nature …, 2022 - nature.com
… 2c), indicating that MET1, DRM1, DRM2, CMT3, and CMT2 are responsible for the maintenance
of the entire DNA methylation in the Arabidopsis genome, and implying that additional …
of the entire DNA methylation in the Arabidopsis genome, and implying that additional …
The mechanism and function of active DNA demethylation in plants
R Liu, Z Lang - Journal of integrative plant biology, 2020 - Wiley Online Library
… the DNA demethylation pathway. We also review the functions of active DNA demethylation
in … Finally, we highlight those aspects of DNA demethylation that require additional research. …
in … Finally, we highlight those aspects of DNA demethylation that require additional research. …
Male fertility in Arabidopsis requires active DNA demethylation of genes that control pollen tube function
…, F Borges, C LeBlanc, A Ungru, A Schnittger… - Nature …, 2021 - nature.com
… DNA and ensure proper pollen tube progression. Moreover, we identify six pollen-specific
genes with increased DNA methylation … In Arabidopsis thaliana, DRM1 and DRM2, which are …
genes with increased DNA methylation … In Arabidopsis thaliana, DRM1 and DRM2, which are …
Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in Arabidopsis
…, Z Wang, X Chai, A Andreucci… - Proceedings of the …, 2019 - National Acad Sciences
… Clean reads were mapped to the Arabidopsis thaliana TAIR 10 genome using BSMAP
with parameters “-m 0 -x 1000 -w 2”, and the python script of BSMAP was used to remove …
with parameters “-m 0 -x 1000 -w 2”, and the python script of BSMAP was used to remove …
Natural variation in DNA methylation homeostasis and the emergence of epialleles
… By examining variation in DNA methylation among hundreds of natural accessions of the
model plant Arabidopsis thaliana, we found evidence that robust targeting of DNA methylation …
model plant Arabidopsis thaliana, we found evidence that robust targeting of DNA methylation …
The Arabidopsis active demethylase ROS1 cis-regulates defence genes by erasing DNA methylation at promoter-regulatory regions
T Halter, J Wang, D Amesefe, E Lastrucci, M Charvin… - Elife, 2021 - elifesciences.org
… Here, we first show that the Arabidopsis active demethylase ROS1 promotes … Arabidopsis
thaliana. In this model organism, DNA methylation is established by the RNA-directed DNA …
thaliana. In this model organism, DNA methylation is established by the RNA-directed DNA …
DNA methylation-linked chromatin accessibility affects genomic architecture in Arabidopsis
… -wide chromatin accessibility profiles of 18 Arabidopsis mutants that are deficient in CG,
CHG, or CHH DNA methylation. We find that DNA methylation in all three sequence contexts …
CHG, or CHH DNA methylation. We find that DNA methylation in all three sequence contexts …
Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana
… We demonstrate that sMHSs are enriched for H3K27me3 and DNA methylation and represent
distinct classes of open chromatin domains that may not be accessible to DNase I or Tn5. …
distinct classes of open chromatin domains that may not be accessible to DNase I or Tn5. …
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