Comparative Genomics Reveals Evolutionary Traits, Mating Strategies, and Pathogenicity-Related Genes Variation of Botryosphaeriaceae

C Yu, Y Diao, Q Lu, J Zhao, S Cui, X Xiong… - Frontiers in …, 2022 - frontiersin.org
… The genome sizes of Dothideomycetes ranged from 17 (Piedraia hortae) to 177 Mbp (Cenococcum
geophilum), and 7,896–34,881 protein-coding genes were detected (Supplementary …

Population Genomics of an Obligately Halophilic Basidiomycete Wallemia ichthyophaga

C Gostinčar, X Sun, J Zajc, C Fang, Y Hou… - Frontiers in …, 2019 - frontiersin.org
… , the differences in gene copy numbers could be ascribed to the differences in annotation,
with all genomes containing two copies except genomes 7 and 8, which alone had only one …

Divergence of a genomic island leads to the evolution of melanization in a halophyte root fungus

Z Yuan, IS Druzhinina, JG Gibbons, Z Zhong… - The ISME …, 2021 - academic.oup.com
variance in allele frequencies of single-nucleotide polymorphisms (SNPs) and copy number
variants … Overall, our results suggest a faster turnover of copy numbers for group 1 compared …

Lifestyle transitions in basidiomycetous fungi are reflected by tRNA composition and translation efficiency of metabolic genes

MA Guerreiro, A Yurkov, M Nowrousian… - bioRxiv, 2023 - biorxiv.org
… We hypothesized that (i) genomes of opportunistic pathogens will have a higher diversity
and copy number of genes associated with lipid transport and metabolism when compared to …

Fungal Communities of Sclerotia Grains from Forest Soils

K Narisawa, A Amasya, YS Nonoyama… - Sclerotia Grains in Soils: A …, 2021 - Springer
… Sclerotia, tentatively identified as the resting bodies of Cenococcum geophilum, were
obtained from cool-temperate forests on Mt. Chokai and Mt. Iwaki in northern Japan and on Mt. …

The genome of Lyophyllum shimeji provides insight into the initial evolution of ectomycorrhizal fungal genomes

Y Kobayashi, TF Shibata, H Hirakawa… - DNA …, 2023 - academic.oup.com
Mycorrhizae are one of the most fundamental symbioses between plants and fungi, with
ectomycorrhizae being the most widespread in boreal forest ecosystems. Ectomycorrhizal fungi …

[引用][C] Determination of Aluminum and Arsenic Enriched in Cenococcum Geophilum Sclerotia Collected from Forest Soils in Mining Areas in Japan Using Time-of …

K Nyamsanjaa, A Genseki, T Hatano, B Oyuntsetseg… - Available at SSRN 4233875

Chromosomal assembly and analyses of genome-wide recombination rates in the forest pathogenic fungus Armillaria ostoyae

R Heinzelmann, D Rigling, G Sipos, M Münsterkötter… - Heredity, 2020 - nature.com
… Here, we analyze recombination rate variation in the basidiomycete fungus Armillaria
ostoyae, which is an aggressive pathogen on a broad range of conifers and other trees. We …

Impacts of conversion from natural forest to cedar plantation on the structure and diversity of root-associated and soil microbial communities

K Sawada, Y Inagaki, S Sugihara, S Funakawa… - Applied Soil …, 2021 - Elsevier
… The measurements were expressed as copy numbers on an oven-dry soil weight basis (105 …
tree roots associated with ECM such as Cenococcum geophilum, Tuber spp., Piloderma spp…

Two-speed genome evolution drives pathogenicity in fungal pathogens of animals

T Wacker, N Helmstetter, D Wilson… - Proceedings of the …, 2023 - National Acad Sciences
… of LINEs that are implicated with gene copy number variations. Additionally, Bsal has a highly
… , Phytophthora infestans, and the symbiotic fungus Cenococcum geophilum (55–58). TEs …