[HTML][HTML] Population-level analysis reveals the widespread occurrence and phenotypic consequence of DNA methylation variation not tagged by genetic variation in …

J Xu, G Chen, PJ Hermanson, Q Xu, C Sun, W Chen… - Genome biology, 2019 - Springer
DNA methylation profiling for a diverse panel of 263 maize inbred genotypes. All genotypes
show similar levels of DNA methylation … in DNA methylation, we profiled DNA methylation

DNA methylation meta-analysis reveals cellular alterations in psychosis and markers of treatment-resistant schizophrenia

E Hannon, EL Dempster, G Mansell, J Burrage, N Bass… - Elife, 2021 - elifesciences.org
… pipeline to meta-analyze EWAS results across datasets to identify associations between
psychosis cases and variation in DNA methylation. We show how DNA methylation data can be …

Genome‐wide analysis of DNA methylation in relation to socioeconomic status during development and early adulthood

TW McDade, CP Ryan, MJ Jones… - American journal of …, 2019 - Wiley Online Library
… with ErmineJ on the genes from CpG sites that were differentially methylated across the
low/low and high/high SES groups (Gillis et al., 2010). These analyses revealed significant over-…

[HTML][HTML] Epigenome-wide meta-analysis of DNA methylation and childhood asthma

SE Reese, CJ Xu, HT Den Dekker, MK Lee… - Journal of Allergy and …, 2019 - Elsevier
… We sought to identify differential DNA methylation in … We investigated the association
of DNA methylation in blood and … gene expression, pathway analyses, detailed functional …

[HTML][HTML] Identification of key DNA methylation-driven genes in prostate adenocarcinoma: an integrative analysis of TCGA methylation data

N Xu, YP Wu, ZB Ke, YC Liang, H Cai, WT Su… - Journal of translational …, 2019 - Springer
… The GO term analysis revealed that the differentially expressed DNA methylation driven
genes were involved in oxidation–reduction process, extracellular exosome, electron carrier …

[HTML][HTML] Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity

T Dahlet, A Argüeso Lleida, H Al Adhami… - Nature …, 2020 - nature.com
… In summary, we reveal an extensive role of DNA methylation … Our work reveals other
functions of DNA methylation for gene … DNA methylation in WT embryos and are derepressed in …

[HTML][HTML] Global methylomic and transcriptomic analyses reveal the broad participation of DNA methylation in daily gene expression regulation of Populus trichocarpa

L Liang, Y Chang, J Lu, X Wu, Q Liu, W Zhang… - Frontiers in Plant …, 2019 - frontiersin.org
DNA methylation on the daily rhythmic expression of these genes. But rhythmic DNA methylation
… Our results suggest that DNA methylation participates widely in daily gene expression …

[HTML][HTML] Integrated analysis of environmental and genetic influences on cord blood DNA methylation in new-borns

D Czamara, G Eraslan, CM Page, J Lahti… - Nature …, 2019 - nature.com
… Finally, our analyses are restricted to DNA methylation in neonatal blood and to pregnancy
environments. Whether similar conclusions can be drawn for methylation levels assessed at …

[HTML][HTML] DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load

H Jung, HS Kim, JY Kim, JM Sun, JS Ahn… - Nature …, 2019 - nature.com
… In this work, we propose that DNA methylation aberration is an important determinant of
the tumour response to host immune activity, and can provide a mechanism by which rapidly …

[HTML][HTML] DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and development

L He, H Huang, M Bradai, C Zhao, Y You, J Ma… - Nature …, 2022 - nature.com
analysis of DNA methylation, RNA expression, and TE movement in this mutant, demonstrating
that: (i) DNA methylation in … Our results also revealed that DNA methylation in introns at …