… increasing density of methylation, but whether density itself … have higher levels of gene
promoter methylation compared with HPV-… of transcriptional repression from DNA methylation at …

… Besides sequencing depth, CpG density also affects the correlations between methylation
… three groups of genes demonstrate more significant transcriptional repression (ie, smaller p-…

… limited to regions with high mCpG densities, often located at CpG-island gene promoters [79]. …
act as a transcriptional repressor, although the functions of DNA methylation still remain to …

… transcriptional repression that was linked to methylation … density was different across
promoter-DMRs, and discovered that downregulated genes feature higher median CpG density in …

… expression changes and DNA methylation that otherwise might … according to methylation
density, considering gene bodies … the linear relationship between gene repression and MeCP2 …

… DNA methylation is generally repressive at high CpG density … It is further tempting to speculate
that methylation of CpGs in … account for the transcriptional repression of methylated CGIs. …

… methylation on genes is coupled with transcriptional activity 27 ; however, our results suggest
that transcription and H3K4 methylation … Then, we repressed its transcription just before …

… (B) Heatmap showing CpG sites density and their mean methylation level in a ±2 kb window
… To understand how Meth+/Exp− and No Meth/Exp− genes were transcriptionally repressed, …

… that allows DNA methylation density assessment and fragment … regions of high CpG density
when compared with MeDIP. … cells acquired repressive de novo DNA methylation at genes …

… is capable of altering TF-DNA interactions and recruiting HDACs, how these distinct
mechanisms contribute to DNA methylation-dependent repression at the genome scale remains …