Retrotransposon BARE-1 and Its Role in Genome Evolution in the Genus Hordeum

CM Vicient, A Suoniemi, K Anamthawat-Jónsson… - The Plant …, 1999 - academic.oup.com
The replicative retrotransposon life cycle offers the potential for explosive increases in copy
number and consequent inflation of genome size. The BARE-1 retrotransposon family of …

Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome

A Suoniemi, K Anamthawat-Jónsson, T Arna… - Plant Molecular …, 1996 - Springer
The barley BARE-1 is a transcribed, copia-like retroelement with well-conserved functional
domains, an active promoter, and a copy number of at least 3× 10 4. We examined its …

The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays

A Suoniemi, A Narvanto, AH Schulman - Plant molecular biology, 1996 - Springer
The BARE-1 retrotransposon occurs in more than 10 4 copies in the barley genome. The
element is bounded by long terminal repeats (LTRs, 1829 bp) containing motifs typical of …

High rate of chimeric gene origination by retroposition in plant genomes

W Wang, H Zheng, C Fan, J Li, J Shi, Z Cai… - The Plant …, 2006 - academic.oup.com
Retroposition is widely found to play essential roles in origination of new mammalian and
other animal genes. However, the scarcity of retrogenes in plants has led to the assumption …

A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion

K Shirasu, AH Schulman, T Lahaye… - Genome …, 2000 - genome.cshlp.org
Organisms with large genomes contain vast amounts of repetitive DNA sequences, much of
which is composed of retrotransposons. Amplification of retrotransposons has been …

Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence

R Kalendar, J Tanskanen, S Immonen… - Proceedings of the …, 2000 - National Acad Sciences
The replicative spread of retrotransposons in the genome creates new insertional
polymorphisms, increasing retrotransposon numbers and potentially both their share of the …

Large retrotransposon derivatives: abundant, conserved but nonautonomous retroelements of barley and related genomes

R Kalendar, CM Vicient, O Peleg… - Genetics, 2004 - academic.oup.com
Retroviruses and LTR retrotransposons comprise two long-terminal repeats (LTRs)
bounding a central domain that encodes the products needed for reverse transcription …

LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model

C Vitte, O Panaud - Cytogenetic and genome research, 2005 - karger.com
Abstract Long Terminal Repeat (LTR) retrotransposons are ubiquitous components of plant
genomes. Because of their copy-and-paste mode of transposition, these elements tend to …

Active retrotransposons are a common feature of grass genomes

CM Vicient, MJ Jaaskelainen, R Kalendar… - Plant …, 2001 - academic.oup.com
A large fraction of the genomes of grasses, members of the family Graminae, is composed of
retrotransposons. These elements resemble animal retroviruses in their structure and …

BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.)

I Manninen, AH Schulman - Plant Molecular Biology, 1993 - Springer
Retroviruses and retrotransposons make up the broad class of retroelements replicating and
transposing via reverse transcriptase. Retroelements have recently been found to be …