Impact of transposable elements on the organization and function of allopolyploid genomes
Transposable elements (TEs) represent an important fraction of plant genomes and are
likely to play a pivotal role in fuelling genome reorganization and functional changes …
likely to play a pivotal role in fuelling genome reorganization and functional changes …
Evolutionary dynamics of duplicated genes in plants
A Lawton-Rauh - Molecular phylogenetics and evolution, 2003 - Elsevier
Gene duplication, arising from region-specific duplication or genome-wide polyploidization,
is a prominent feature in plant genome evolution. Understanding the mechanisms …
is a prominent feature in plant genome evolution. Understanding the mechanisms …
[HTML][HTML] Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica
T Paape, RV Briskine, G Halstead-Nussloch… - Nature …, 2018 - nature.com
Genome duplication is widespread in wild and crop plants. However, little is known about
genome-wide selection in polyploids due to the complexity of duplicated genomes. In …
genome-wide selection in polyploids due to the complexity of duplicated genomes. In …
[HTML][HTML] Evolution of plant genome architecture
We have witnessed an explosion in our understanding of the evolution and structure of plant
genomes in recent years. Here, we highlight three important emergent realizations:(1) that …
genomes in recent years. Here, we highlight three important emergent realizations:(1) that …
The evolutionary dynamics of plant duplicate genes
RC Moore, MD Purugganan - Current opinion in plant biology, 2005 - Elsevier
Given the prevalence of duplicate genes and genomes in plant species, the study of their
evolutionary dynamics has been a focus of study in plant evolutionary genetics over the past …
evolutionary dynamics has been a focus of study in plant evolutionary genetics over the past …
Mechanisms of genomic rearrangements and gene expression changes in plant polyploids
ZJ Chen, Z Ni - Bioessays, 2006 - Wiley Online Library
Polyploidy is produced by multiplication of a single genome (autopolyploid) or combination
of two or more divergent genomes (allopolyploid). The available data obtained from the …
of two or more divergent genomes (allopolyploid). The available data obtained from the …
The role of hybridization in plant speciation
The importance of hybridization in plant speciation and evolution has been debated for
decades, with opposing views of hybridization as either a creative evolutionary force or …
decades, with opposing views of hybridization as either a creative evolutionary force or …
Structural variation and genome complexity: is dispensable really dispensable?
Highlights•Structural variants are the major components of dispensable genome.•Structural
variants might have important functional consequences.•Next generation sequencing is a …
variants might have important functional consequences.•Next generation sequencing is a …
Next‐generation sequencing and genome evolution in allopolyploids
• Premise of the study: Hybridization and polyploidization (allopolyploidy) are ubiquitous in
the evolution of plants, but tracing the origins and subsequent evolution of the constituent …
the evolution of plants, but tracing the origins and subsequent evolution of the constituent …
[HTML][HTML] How the pan-genome is changing crop genomics and improvement
Crop genomics has seen dramatic advances in recent years due to improvements in
sequencing technology, assembly methods, and computational resources. These advances …
sequencing technology, assembly methods, and computational resources. These advances …