Cancer genomics: technology, discovery, and translation

B Tran, JE Dancey, S Kamel-Reid… - Journal of Clinical …, 2012 - ascopubs.org
In recent years, the increasing awareness that somatic mutations and other genetic
aberrations drive human malignancies has led us within reach of personalized cancer …

RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues

K Yizhak, F Aguet, J Kim, JM Hess, K Kübler, J Grimsby… - Science, 2019 - science.org
INTRODUCTION Cancer genome studies have contributed to the analysis and discovery of
somatic mutations that drive cancer growth. However, studying the genetic makeup of a …

COSMIC: exploring the world's knowledge of somatic mutations in human cancer

SA Forbes, D Beare, P Gunasekaran… - Nucleic acids …, 2015 - academic.oup.com
Abstract COSMIC, the Catalogue Of Somatic Mutations In Cancer (http://cancer. sanger. ac.
uk) is the world's largest and most comprehensive resource for exploring the impact of …

A quantification method of somatic mutations in normal tissues and their accumulation in pediatric patients with chemotherapy

S Ueda, S Yamashita, M Nakajima… - Proceedings of the …, 2022 - National Acad Sciences
Somatic mutations are accumulated in normal human tissues with aging and exposure to
carcinogens. If we can accurately count any passenger mutations in any single DNA …

Advances in computational approaches for prioritizing driver mutations and significantly mutated genes in cancer genomes

F Cheng, J Zhao, Z Zhao - Briefings in bioinformatics, 2016 - academic.oup.com
Cancer is often driven by the accumulation of genetic alterations, including single nucleotide
variants, small insertions or deletions, gene fusions, copy-number variations, and large …

Progressing from gene mutations to cancer

E Fearon, G Bommer - 2008 - dial.uclouvain.be
A root cause of cancer is the accumulation of defects in genes that play critical roles in
regulating cell proliferation, cellular differentiation, and cell death. The mutations in cancer …

Ultra-sensitive TP53 sequencing for cancer detection reveals progressive clonal selection in normal tissue over a century of human lifespan

JJ Salk, K Loubet-Senear, E Maritschnegg… - Cell Reports, 2019 - cell.com
High-accuracy next-generation DNA sequencing promises a paradigm shift in early cancer
detection by enabling the identification of mutant cancer molecules in minimally invasive …

[HTML][HTML] The sculpting of somatic mutational landscapes by evolutionary forces and their impacts on aging‐related disease

F Marongiu, J DeGregori - Molecular Oncology, 2022 - ncbi.nlm.nih.gov
Aging represents the major risk factor for the development of cancer and many other
diseases. Recent findings show that normal tissues become riddled with expanded clones …

Somatic mutation and clonal expansions in human tissues

I Martincorena - Genome Medicine, 2019 - Springer
Editorial summary Recent sequencing studies on healthy skin and esophagus have found
that, as we age, these tissues become colonized by mutant clones of cells carrying driver …

The translation of cancer genomics: time for a revolution in clinical cancer care

ER Mardis - Genome medicine, 2014 - Springer
The introduction of next-generation sequencing technologies has dramatically impacted the
life sciences, perhaps most profoundly in the area of cancer genomics. Clinical applications …