A subtelomeric non-LTR retrotransposon Hebe in the bdelloid rotifer Adineta vaga is subject to inactivation by deletions but not 5' truncations

EA Gladyshev, IR Arkhipova - Mobile DNA, 2010 - Springer
Background Rotifers of the class Bdelloidea are microscopic freshwater invertebrates best
known for: their capacity for anhydrobiosis; the lack of males and meiosis; and for the ability …

Comparative Genomic Analysis Reveals Multiple Long Terminal Repeats, Lineage-Specific Amplification, and Frequent Interelement Recombination for Cassandra …

H Yin, J Du, L Li, C Jin, L Fan, M Li… - Genome Biology and …, 2014 - academic.oup.com
Cassandra transposable elements belong to a specific group of terminal-repeat
retrotransposons in miniature (TRIM). Although Cassandra TRIM elements have been found …

An active non-LTR retrotransposon with tandem structure in the compact genome of the pufferfish Tetraodon nigroviridis

L Bouneau, C Fischer, C Ozouf-Costaz… - Genome …, 2003 - genome.cshlp.org
The fish retrotransposable element Zebulon encodes a reverse transcriptase and a carboxy-
terminal restriction enzyme-like endonuclease, and is related phylogenetically to site …

Active retrotransposons are a common feature of grass genomes

CM Vicient, MJ Jaaskelainen, R Kalendar… - Plant …, 2001 - academic.oup.com
A large fraction of the genomes of grasses, members of the family Graminae, is composed of
retrotransposons. These elements resemble animal retroviruses in their structure and …

Endonuclease-containing Penelope retrotransposons in the bdelloid rotifer Adineta vaga exhibit unusual structural features and play a role in expansion of host …

IR Arkhipova, IA Yushenova, F Rodriguez - Mobile DNA, 2013 - Springer
Abstract Background Penelope-like elements (PLEs) are an enigmatic group of
retroelements sharing a common ancestor with telomerase reverse transcriptases. In our …

Pao, a highly divergent retrotransposable element from Bombyx mori containing long terminal repeats with tandem copies of the putative R region

Y Xiong, WD Burke, TH Eickbush - Nucleic acids research, 1993 - academic.oup.com
Analysls of aberrant ribosomal DNA (rDNA) repeats of Bombyx mori resulted In the
discovery of a 4.8 kllobase retrotransposable element, Pao. Approximately 40 copies of Pao …

Retrotransposon BARE‐1: expression of encoded proteins and formation of virus‐like particles in barley cells

M Jääskeläinen, AH Mykkänen, T Arna… - The Plant …, 1999 - Wiley Online Library
Retrotransposons are ubiquitous and major components of plant genomes, and are
characteristically retroviral‐like in their genomic structure and in the major proteins encoded …

Characterization, genomic organization and chromosomal distribution of Ty1-copia retrotransposons in species of Hypochaeris (Asteraceae)

CF Ruas, H Weiss-Schneeweiss, TF Stuessy… - Gene, 2008 - Elsevier
This study aims to analyze the diversity of Ty1-copia retrotransposons in 18 taxa of
Hypochaeris, including two Old World species H. maculata (2n= 2x= 10) and H. angustifolia …

The genomic impact of gene retrocopies: what have we learned from comparative genomics, population genomics, and transcriptomic analyses?

C Casola, E Betrán - Genome biology and evolution, 2017 - academic.oup.com
Gene duplication is a major driver of organismal evolution. Gene retroposition is a
mechanism of gene duplication whereby a gene's transcript is used as a template to …

Molecular and Cytological Characterization of Centromeric Retrotransposons in a Wild Relative of Rice, Oryza granulata

D Gao, Z Gong, RA Wing, J Jiang, SA Jackson - Tropical plant biology, 2011 - Springer
Centromeric retrotransposons (CRs) are important component of the functional centromeres
of rice chromosomes. To track the evolution of the CR elements in genus Oryza, we …