Natural selection maintains the transcribed LTR retrotransposons in Nosema bombycis

H Xiang, G Pan, R Zhang, J Xu, T Li, W Li… - Journal of Genetics and …, 2010 - Elsevier
Eight intact LTR retrotransposons (Nbr1–Nbr8) have been previously characterized from the
genome of Nosema bombycis, a eukaryotic parasite with a compact and reduced genome …

On the origins of species: does evolution repeat itself in polyploid populations of independent origin?

DE Soltis, RJA Buggs, WB Barbazuk… - Cold spring harbor …, 2009 - symposium.cshlp.org
Multiple origins of the same polyploid species pose the question: Does evolution repeat
itself in these independently formed lineages? Tragopogon is a unique evolutionary model …

[PDF][PDF] Utilization of genomic retrotransposons as cladistic markers

A Mansour - J Cell Mol Biol, 2008 - academia.edu
Genomic retrotransposons are major genomic components in most eukaryotic organisms.
Their abundance in the genome is generally correlated with genome size. These elements …

The distribution and copy number of copia-like retrotransposons in rice (Oryza sativa L.) and their implications in the organization and evolution of the rice genome

S Wang, N Liu, K Peng… - Proceedings of the …, 1999 - National Acad Sciences
We used 22 fragments corresponding to the reverse transcriptase domain of copia-like
retrotransposons as representatives to study the organization and distribution of these …

MAX, a novel retrotransposon of the BEL-Pao family, is nested within the Bari 1 cluster at the heterochromatic h39 region of chromosome 2 in Drosophila …

RM Marsano, S Marconi, R Moschetti… - Molecular Genetics and …, 2004 - Springer
A homogeneous array of 80 tandem repeats of the Bari1 transposon is located in the
pericentromeric h39 region of chromosome 2 of Drosophila melanogaster. Here, we report …

Two different clades of copia-like retrotransposons in the red alga, Porphyra yezoensis

S Peddigari, W Zhang, K Takechi, H Takano, S Takio - Gene, 2008 - Elsevier
A copia-like retrotransposon referred to as PyRE1G1 was isolated from the genome of the
red alga Porphyra yezoensis. PyRE1G1 is 4807 bp in length, with 204 bp long terminal …

Nested Ty3-gypsy retrotransposons of a single Beta procumbens centromere contain a putative chromodomain

B Weber, T Schmidt - Chromosome Research, 2009 - Springer
LTR retrotransposons belong to a major group of DNA sequences that are often localized in
plant centromeres. Using BAC inserts originating from the centromere of a monosomic wild …

Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza

JSS Ammiraju, A Zuccolo, Y Yu, X Song… - The Plant …, 2007 - Wiley Online Library
Long terminal repeat (LTR) retrotransposons constitute a significant portion of most
eukaryote genomes and can dramatically change genome size and organization. Although …

RIRE1, a retrotransposon from wild rice Oryza australiensis

K Noma, R Nakajima, H Ohtsubo… - Genes & genetic …, 1997 - jstage.jst.go.jp
RIRE1 is a retrotransposon present in wild rice Oryza australiensis in an extraordinary
number of copies, and only a portion of the LTR sequence has been determined previously …

IRAP, REMAP and ISSR Fingerprinting in Newly Formed Hexaploid Tritordeum (X Tritordeum Ascherson et Graebner) and Respective Parental Species

S Cabo, A Carvalho, L Rocha, A Martin… - Plant molecular biology …, 2014 - Springer
Abstract Retrotransposon (RTN)-based markers, such as the inter-retrotransposon amplified
polymorphism (IRAP) and the retrotransposon-microsatellite amplified polymorphism …