Epigenetic and developmental regulation in plant polyploids

Q Song, ZJ Chen - Current opinion in plant biology, 2015 - Elsevier
Highlights•Polyploidy is a common evolutionary feature in all eukaryotes especially in
plants.•Ploidy and intergenomic hybridization induce genetic and epigenetic changes.•DNA …

Polyploidy and genome evolution in plants

PS Soltis, DB Marchant, Y Van de Peer… - Current opinion in …, 2015 - Elsevier
Plant genomes vary in size and complexity, fueled in part by processes of whole-genome
duplication (WGD; polyploidy) and subsequent genome evolution. Despite repeated …

Polyploidy, evolutionary opportunity, and crop adaptation

AH Paterson - Genetics of adaptation, 2005 - Springer
The finding that even the smallest of plant genomes has incurred multiple genome-wide
chromatin duplication events, some of which may predate the origins of the angiosperms …

Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution

G Blanc, KH Wolfe - The Plant Cell, 2004 - academic.oup.com
To study the evolutionary effects of polyploidy on plant gene functions, we analyzed
functional genomics data for a large number of duplicated gene pairs formed by ancient …

Polyploidy: an evolutionary and ecological force in stressful times

Y Van de Peer, TL Ashman, PS Soltis, DE Soltis - The Plant Cell, 2021 - academic.oup.com
Polyploidy has been hypothesized to be both an evolutionary dead-end and a source for
evolutionary innovation and species diversification. Although polyploid organisms …

Polyploidy-associated genome modifications during land plant evolution

Y Jiao, AH Paterson - … of the Royal Society B: Biological …, 2014 - royalsocietypublishing.org
The occurrence of polyploidy in land plant evolution has led to an acceleration of genome
modifications relative to other crown eukaryotes and is correlated with key innovations in …

Nuclear DNA content and nuclear and cell volume are positively correlated in angiosperms

G Jovtchev, V Schubert, A Meister, M Barow… - … and genome research, 2006 - karger.com
Volumes of flow sorted nuclei were analyzed from two highly endopolyploid (diploids with
endopolyploid tissues) species (Arabidopsis thaliana and Barbarea stricta), from a less …

Duplicate genes increase expression diversity in closely related species and allopolyploids

M Ha, ED Kim, ZJ Chen - Proceedings of the National …, 2009 - National Acad Sciences
Polyploidy or whole genome duplication (WGD) provides raw genetic materials for
sequence and expression evolution of duplicate genes. However, the mode and tempo of …

Homoeologous exchanges cause extensive dosage‐dependent gene expression changes in an allopolyploid crop

A Lloyd, A Blary, D Charif, C Charpentier… - New …, 2018 - Wiley Online Library
Structural variation is a major source of genetic diversity and an important substrate for
selection. In allopolyploids, homoeologous exchanges (ie between the constituent …

Understanding mechanisms of novel gene expression in polyploids

TC Osborn, JC Pires, JA Birchler, DL Auger, ZJ Chen… - Trends in genetics, 2003 - cell.com
Polyploidy has long been recognized as a prominent force shaping the evolution of
eukaryotes, especially flowering plants. New phenotypes often arise with polyploid formation …