[PDF][PDF] Integrator-dependent and allosteric/intrinsic mechanisms ensure efficient termination of snRNA transcription

L Davidson, L Francis, JD Eaton, S West - Cell reports, 2020 - cell.com
Many RNA polymerases terminate transcription using allosteric/intrinsic mechanisms,
whereby protein alterations or nucleotide sequences promote their release from DNA. RNA …

Processive antitermination

JR Goodson, WC Winkler - Microbiology spectrum, 2018 - Am Soc Microbiol
Transcription is a discontinuous process, where each nucleotide incorporation cycle offers a
decision between elongation, pausing, halting, or termination. Many cis-acting regulatory …

Nonequilibrium mechanism of transcription termination from observations of single RNA polymerase molecules

H Yin, I Artsimovitch, R Landick… - Proceedings of the …, 1999 - National Acad Sciences
Cessation of transcription at specific terminator DNA sequences is used by viruses, bacteria,
and eukaryotes to regulate the expression of downstream genes, but the mechanisms of …

Attenuation of eukaryotic protein-coding gene expression via premature transcription termination

DC Tatomer, JE Wilusz - Cold Spring Harbor symposia on …, 2019 - symposium.cshlp.org
A complex network of RNA transcripts is generated from eukaryotic genomes, many of which
are processed in unexpected ways. Here, we highlight how premature transcription …

Contending with transcriptional arrest during RNAPII transcript elongation

JQ Svejstrup - Trends in biochemical sciences, 2007 - cell.com
Studies of RNA polymerase II (RNAPII) transcript elongation have revealed an extremely
complex biochemical process. Obstacles to transcription, such as nucleosomes and DNA …

[HTML][HTML] RNA folding in transcription elongation complex: implication for transcription termination

L Lubkowska, AS Maharjan, N Komissarova - Journal of Biological …, 2011 - ASBMB
Intrinsic transcription termination signal in DNA consists of a short inverted repeat followed
by a T-rich stretch. Transcription of this sequence by RNA polymerase (RNAP) results in …

Information processing by RNA polymerase: recognition of regulatory signals during RNA chain elongation

RA Mooney, I Artsimovitch, R Landick - Journal of Bacteriology, 1998 - Am Soc Microbiol
The primary function of RNA polymerase (RNAP) is to produce RNA transcripts optimal for a
given environmental or developmental state of a cell. RNAP accomplishes this selection by …

Intrinsic translocation barrier as an initial step in pausing by RNA polymerase II

M Imashimizu, ML Kireeva, L Lubkowska… - Journal of molecular …, 2013 - Elsevier
Pausing of RNA polymerase II (RNAP II) by backtracking on DNA is a major regulatory
mechanism in control of eukaryotic transcription. Backtracking occurs by extrusion of the 3 …

[PDF][PDF] Pulling on the nascent RNA during transcription does not alter kinetics of elongation or ubiquitous pausing

RV Dalal, MH Larson, KC Neuman, J Gelles, R Landick… - Molecular cell, 2006 - cell.com
Transcriptional elongation and termination by RNA polymerase (RNAP) are controlled by
interactions among the nascent RNA, DNA, and RNAP that comprise the ternary …

Transcriptional pausing as a mediator of bacterial gene regulation

R Landick - Annual Review of Microbiology, 2021 - annualreviews.org
Cellular life depends on transcription of DNA by RNA polymerase to express genetic
information. RNA polymerase has evolved not just to read information from DNA and write it …