RACE-SEQ and Population-Wide Polymorphism Susceptibility Testing for Endonucleolytically Active, RNA-Targeting Therapeutics
L Usher, PI Theotokis, SA Moschos - Oligonucleotide-Based Therapies …, 2019 - Springer
High-throughput sequencing of the products of 5′ RNA ligase-mediated rapid amplification
of cDNA ends (5′ RLM-RACE) reactions (RACE-SEQ) enables the mapping and digital …
of cDNA ends (5′ RLM-RACE) reactions (RACE-SEQ) enables the mapping and digital …
[引用][C] What Is RASL-seq and How Can It Contribute to Your Drug Discovery Pipeline?
D Cabuzu - alitheagenomics.com
In the current ocean of high-throughput sequencing techniques, it can be overwhelming to
understand how a particular technology works, what it excels at, and what it struggles to …
understand how a particular technology works, what it excels at, and what it struggles to …
[HTML][HTML] Profiling the mismatch tolerance of Argonaute 2 through deep sequencing of sliced polymorphic viral RNAs
PI Theotokis, L Usher, CK Kortschak… - … Therapy-Nucleic Acids, 2017 - cell.com
Low allelic and clonal variability among endogenous RNAi targets has focused mismatch
tolerance studies to RNAi-active guide strands. However, the inherent genomic instability of …
tolerance studies to RNAi-active guide strands. However, the inherent genomic instability of …
RASLseqTools: open-source methods for designing and analyzing R NA-mediated oligonucleotide A nnealing, S election, and, L igation seq uencing (RASL-seq) …
ABSTRACT R NA-mediated oligonucleotide A nnealing, S election, and L igation (RASL-
seq) is a method to measure the expression of hundreds of genes in thousands of samples …
seq) is a method to measure the expression of hundreds of genes in thousands of samples …
In vivo genome-wide pooled RNAi screens in cancer cells to identify determinants of chemotherapy/drug response
ML Dahn, P Marcato - Mapping Genetic Interactions, 2021 - Springer
Large-scale RNAi screens (ie, genome-wide arrays and pools) can reveal the essential
biological functions of previously uncharacterized genes. Due to the nature of the selection …
biological functions of previously uncharacterized genes. Due to the nature of the selection …
Ultra-large-scale genomics approaches to improve cancer therapeutic response
JMB Pineda - 2022 - digital.lib.washington.edu
The advent of low-cost, high-throughput sequencing technologies has elucidated targetable
cancer-specific genomic alterations and allowed the development of precision therapies and …
cancer-specific genomic alterations and allowed the development of precision therapies and …
Precision medicine in the age of big data: the present and future role of large‐scale unbiased sequencing in drug discovery and development
P Vicini, O Fields, E Lai, ED Litwack… - Clinical …, 2016 - Wiley Online Library
High throughput molecular and functional profiling of patients is a key driver of precision
medicine. DNA and RNA characterization has been enabled at unprecedented cost and …
medicine. DNA and RNA characterization has been enabled at unprecedented cost and …
Comparison of high-throughput single-cell RNA-seq methods for ex vivo drug screening
H Gezelius, AP Enblad, A Lundmark… - NAR Genomics and …, 2024 - academic.oup.com
Functional precision medicine (FPM) aims to optimize patient-specific drug selection based
on the unique characteristics of their cancer cells. Recent advancements in high throughput …
on the unique characteristics of their cancer cells. Recent advancements in high throughput …
[HTML][HTML] Reactivity-based RNA profiling for analyzing transcriptome interactions of small molecules in human cells
Protein-targeted small-molecule drugs may unintentionally bind intracellular RNA,
contributing to drug toxicity. Moreover, new drugs are actively sought for intentionally …
contributing to drug toxicity. Moreover, new drugs are actively sought for intentionally …
[PDF][PDF] Loci specific epigenetic drug sensitivity
Therapeutic targeting of epigenetic modulators offers a novel approach to the treatment of
multiple diseases. The cellular consequences of chemical compounds that target epigenetic …
multiple diseases. The cellular consequences of chemical compounds that target epigenetic …