A movable feast: diverse retrotransposons and their contribution to barley genome dynamics

AH Schulman, R Kalendar - Cytogenetic and genome research, 2005 - karger.com
Cellular genes comprise at most 5% of the barley genome; the rest is occupied primarily by
retrotransposons. Retrotransposons move intracellularly by a replicative mechanism similar …

Large retrotransposon derivatives: abundant, conserved but nonautonomous retroelements of barley and related genomes

R Kalendar, CM Vicient, O Peleg… - Genetics, 2004 - academic.oup.com
Retroviruses and LTR retrotransposons comprise two long-terminal repeats (LTRs)
bounding a central domain that encodes the products needed for reverse transcription …

Variability, Recombination, and Mosaic Evolution of the Barley BARE-1 Retrotransposon

CM Vicient, R Kalendar, AH Schulman - Journal of Molecular Evolution, 2005 - Springer
BARE-1 is a highly abundant, copia-like, LTR (long terminal repeat) retrotransposon in the
genus Hordeum. The LTRs provide the promoter, terminator, and polyadenylation signals …

Retrotransposon BARE-1 and Its Role in Genome Evolution in the Genus Hordeum

CM Vicient, A Suoniemi, K Anamthawat-Jónsson… - The Plant …, 1999 - academic.oup.com
The replicative retrotransposon life cycle offers the potential for explosive increases in copy
number and consequent inflation of genome size. The BARE-1 retrotransposon family of …

Retrotransposon-mediated genome evolution on a local ecological scale

JF Wendel, SR Wessler - Proceedings of the National …, 2000 - National Acad Sciences
Fifteen years later we still know nothing about the mechanisms underlying genome-
restructuring events in response to environmental cues. This is despite numerous studies …

Active retrotransposons are a common feature of grass genomes

CM Vicient, MJ Jaaskelainen, R Kalendar… - Plant …, 2001 - academic.oup.com
A large fraction of the genomes of grasses, members of the family Graminae, is composed of
retrotransposons. These elements resemble animal retroviruses in their structure and …

Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome

A Suoniemi, K Anamthawat-Jónsson, T Arna… - Plant Molecular …, 1996 - Springer
The barley BARE-1 is a transcribed, copia-like retroelement with well-conserved functional
domains, an active promoter, and a copy number of at least 3× 10 4. We examined its …

Comparison of the utility of barley retrotransposon families for genetic analysis by molecular marker techniques

F Leigh, R Kalendar, V Lea, D Lee, P Donini… - Molecular Genetics and …, 2003 - Springer
Abstract The Sequence-Specific Amplification Polymorphism (S-SAP) method, and the
related molecular marker techniques IRAP (inter-retrotransposon amplified polymorphism) …

Structure, functionality, and evolution of the BARE-1 retrotransposon of barley

CM Vicient, R Kalendar… - … Elements and Genome …, 2000 - Springer
The BARE-1 retrotransposon is a major, active component of the genome of barley
(Hordeum vulgare L.) and other Hordeum species. Copia-like in its organization, it consists …

BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.)

I Manninen, AH Schulman - Plant Molecular Biology, 1993 - Springer
Retroviruses and retrotransposons make up the broad class of retroelements replicating and
transposing via reverse transcriptase. Retroelements have recently been found to be …