ECO: the Evidence and Conclusion Ontology, an update for 2022
S Nadendla, R Jackson, J Munro… - Nucleic Acids …, 2022 - academic.oup.com
Abstract The Evidence and Conclusion Ontology (ECO) is a community resource that
provides an ontology of terms used to capture the type of evidence that supports biomedical …
provides an ontology of terms used to capture the type of evidence that supports biomedical …
ECO, the Evidence & Conclusion Ontology: community standard for evidence information
Abstract The Evidence and Conclusion Ontology (ECO) contains terms (classes) that
describe types of evidence and assertion methods. ECO terms are used in the process of …
describe types of evidence and assertion methods. ECO terms are used in the process of …
[HTML][HTML] Standardized description of scientific evidence using the Evidence Ontology (ECO)
MC Chibucos, CJ Mungall, R Balakrishnan… - Database, 2014 - academic.oup.com
The Evidence Ontology (ECO) is a structured, controlled vocabulary for capturing evidence
in biological research. ECO includes diverse terms for categorizing evidence that supports …
in biological research. ECO includes diverse terms for categorizing evidence that supports …
[PDF][PDF] The evidence and conclusion ontology (ECO): supporting GO annotations
MC Chibucos, DA Siegele, JC Hu… - The gene ontology …, 2017 - library.oapen.org
Abstract The Evidence and Conclusion Ontology (ECO) is a community resource for
describing the various types of evidence that are generated during the course of a scientific …
describing the various types of evidence that are generated during the course of a scientific …
[PDF][PDF] SEPIO: A Semantic Model for the Integration and Analysis of Scientific Evidence.
MH Brush, KA Shefchek, MA Haendel - ICBO/BioCreative, 2016 - ceur-ws.org
Information Ontology (SEPIO) was developed to support the description of evidence and
provenance information for scientific claims. The core model represents the relationships …
provenance information for scientific claims. The core model represents the relationships …
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies
R Jackson, N Matentzoglu, JA Overton, R Vita… - Database, 2021 - academic.oup.com
Biological ontologies are used to organize, curate and interpret the vast quantities of data
arising from biological experiments. While this works well when using a single ontology …
arising from biological experiments. While this works well when using a single ontology …
The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations
Biocuration has become a cornerstone for analyses in biology, and to meet needs, the
amount of annotations has considerably grown in recent years. However, the reliability of …
amount of annotations has considerably grown in recent years. However, the reliability of …
Formal axioms in biomedical ontologies improve analysis and interpretation of associated data
Motivation Over the past years, significant resources have been invested into formalizing
biomedical ontologies. Formal axioms in ontologies have been developed and used to …
biomedical ontologies. Formal axioms in ontologies have been developed and used to …
The Gene Ontology resource: enriching a GOld mine
Nucleic acids research, 2021 - academic.oup.com
Abstract The Gene Ontology Consortium (GOC) provides the most comprehensive resource
currently available for computable knowledge regarding the functions of genes and gene …
currently available for computable knowledge regarding the functions of genes and gene …
[HTML][HTML] STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation
Abstract Background Gene Ontology (GO) enrichment analysis remains one of the most
common methods for hypothesis generation from high throughput datasets. However, we …
common methods for hypothesis generation from high throughput datasets. However, we …