GH97 is a new family of glycoside hydrolases, which is related to the α-galactosidase superfamily

DG Naumoff - BMC genomics, 2005 - Springer
Background As a rule, about 1% of genes in a given genome encode glycoside hydrolases
and their homologues. On the basis of sequence similarity they have been grouped into …

Crystal structure of the Enterococcus faecalis α‐N‐acetylgalactosaminidase, a member of the glycoside hydrolase family 31

T Miyazaki, EY Park - FEBS letters, 2020 - Wiley Online Library
Glycoside hydrolases catalyze the hydrolysis of glycosidic linkages in carbohydrates. The
glycoside hydrolase family 31 (GH31) contains α‐glucosidase, α‐xylosidase, α …

Structural and biochemical characterization of novel bacterial α-galactosidases belonging to glycoside hydrolase family 31

T Miyazaki, Y Ishizaki, M Ichikawa… - Biochemical …, 2015 - portlandpress.com
Glycoside hydrolase family 31 (GH31) proteins have been reportedly identified as exo-α-
glycosidases with activity for α-glucosides and α-xylosides. We focused on a GH31 …

GH101 family of glycoside hydrolases: Subfamily structure and evolutionary connections with other families

DG Naumoff - Journal of Bioinformatics and Computational Biology, 2010 - World Scientific
The GH101 family is composed of endo-α-N-acetylgalactosaminidases and their
homologues. Pairwise sequence comparison and phylogenetic analysis allowed us to …

Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

H Aspeborg, PM Coutinho, Y Wang, H Brumer… - BMC evolutionary …, 2012 - Springer
Abstract Background The large Glycoside Hydrolase family 5 (GH5) groups together a wide
range of enzymes acting on β-linked oligo-and polysaccharides, and glycoconjugates from a …

Analysis of domain architecture and phylogenetics of family 2 glycoside hydrolases (GH2)

D Talens-Perales, A Gorska, DH Huson, J Polaina… - PLoS …, 2016 - journals.plos.org
In this work we report a detailed analysis of the topology and phylogenetics of family 2
glycoside hydrolases (GH2). We distinguish five topologies or domain architectures based …

Structural basis of the strict specificity of a bacterial GH31 α-1, 3-glucosidase for nigerooligosaccharides

M Ikegaya, T Moriya, N Adachi, M Kawasaki… - Journal of Biological …, 2022 - ASBMB
Carbohydrate-active enzymes are involved in the degradation, biosynthesis, and
modification of carbohydrates and vary with the diversity of carbohydrates. The glycoside …

[HTML][HTML] Consolidation of glycosyl hydrolase family 30: a dual domain 4/7 hydrolase family consisting of two structurally distinct groups

FJ St John, JM González, E Pozharski - FEBS letters, 2010 - Elsevier
In this work glycosyl hydrolase (GH) family 30 (GH30) is analyzed and shown to consist of its
currently classified member sequences as well as several homologous sequence groups …

[HTML][HTML] Analysis of glycoside hydrolase family 98: Catalytic machinery, mechanism and a novel putative carbohydrate binding module

DJ Rigden - FEBS letters, 2005 - Elsevier
Glycoside hydrolases (GHs) are diverse enzymes of biotechnological and medical
importance. Bioinformatics contributes to our understanding of GH structure and function in …

Biochemical Analysis of Thermotoga maritima GH36 α-Galactosidase (TmGalA) Confirms the Mechanistic Commonality of Clan GH-D Glycoside Hydrolases

DA Comfort, KS Bobrov, DR Ivanen, KA Shabalin… - Biochemistry, 2007 - ACS Publications
Organization of glycoside hydrolase (GH) families into clans expands the utility of
information on catalytic mechanisms of member enzymes. This issue was examined for …