MODOMICS: a database of RNA modification pathways. 2021 update

P Boccaletto, F Stefaniak, A Ray… - Nucleic acids …, 2022 - academic.oup.com
The MODOMICS database has been, since 2006, a manually curated and centralized
resource, storing and distributing comprehensive information about modified …

MODOMICS: a database of RNA modification pathways. 2017 update

P Boccaletto, MA Machnicka, E Purta… - Nucleic acids …, 2018 - academic.oup.com
MODOMICS is a database of RNA modifications that provides comprehensive information
concerning the chemical structures of modified ribonucleosides, their biosynthetic pathways …

MODOMICS: an operational guide to the use of the RNA modification pathways database

P Boccaletto, B Bagiński - RNA bioinformatics, 2021 - Springer
MODOMICS is an established database of RNA modifications that provides comprehensive
information concerning chemical structures of modified ribonucleosides, their biosynthetic …

MODOMICS: a database of RNA modification pathways—2013 update

MA Machnicka, K Milanowska… - Nucleic acids …, 2012 - academic.oup.com
MODOMICS is a database of RNA modifications that provides comprehensive information
concerning the chemical structures of modified ribonucleosides, their biosynthetic pathways …

MODOMICS: a database of RNA modification pathways

S Dunin-Horkawicz, A Czerwoniec… - Nucleic acids …, 2006 - academic.oup.com
MODOMICS is the first comprehensive database resource for systems biology of RNA
modification. It integrates information about the chemical structure of modified nucleosides …

MODOMICS: a database of RNA modification pathways. 2008 update

A Czerwoniec, S Dunin-Horkawicz, E Purta… - Nucleic acids …, 2009 - academic.oup.com
MODOMICS, a database devoted to the systems biology of RNA modification, has been
subjected to substantial improvements. It provides comprehensive information on the …

MODOMICS: a database of RNA modifications and related information. 2023 update

A Cappannini, A Ray, E Purta, S Mukherjee… - Nucleic Acids …, 2024 - academic.oup.com
The MODOMICS database was updated with recent data and now includes new data types
related to RNA modifications. Changes to the database include an expanded modification …

RMBase v3. 0: decode the landscape, mechanisms and functions of RNA modifications

J Xuan, L Chen, Z Chen, J Pang, J Huang… - Nucleic Acids …, 2024 - academic.oup.com
Although over 170 chemical modifications have been identified, their prevalence,
mechanism and function remain largely unknown. To enable integrated analysis of diverse …

RMBase: a resource for decoding the landscape of RNA modifications from high-throughput sequencing data

WJ Sun, JH Li, S Liu, J Wu, H Zhou, LH Qu… - Nucleic acids …, 2016 - academic.oup.com
Although more than 100 different types of RNA modifications have been characterized
across all living organisms, surprisingly little is known about the modified positions and their …

Naturally occurring modified ribonucleosides

PJ McCown, A Ruszkowska, CN Kunkler… - Wiley …, 2020 - Wiley Online Library
The chemical identity of RNA molecules beyond the four standard ribonucleosides has
fascinated scientists since pseudouridine was characterized as the “fifth” ribonucleotide in …