A crucial RNA-binding lysine residue in the Nab3 RRM domain undergoes SET1 and SET3-responsive methylation

KY Lee, A Chopra, GL Burke, Z Chen… - Nucleic Acids …, 2020 - academic.oup.com
Abstract The Nrd1–Nab3–Sen1 (NNS) complex integrates molecular cues to direct
termination of noncoding transcription in budding yeast. NNS is positively regulated by …

H3K4 trimethylation by Set1 promotes efficient termination by the Nrd1-Nab3-Sen1 pathway

N Terzi, LS Churchman, L Vasiljeva… - … and cellular biology, 2011 - Taylor & Francis
In Saccharomyces cerevisiae, the Nrd1-Nab3-Sen1 pathway mediates the termination of
snoRNAs and cryptic unstable transcripts (CUTs). Both Nrd1 and the Set1 histone H3K4 …

Yeast Nrd1, Nab3, and Sen1 transcriptome-wide binding maps suggest multiple roles in post-transcriptional RNA processing

N Jamonnak, TJ Creamer, MM Darby, P Schaughency… - Rna, 2011 - rnajournal.cshlp.org
RNA polymerase II transcribes both coding and noncoding genes, and termination of these
different classes of transcripts is facilitated by different sets of termination factors. Pre …

Structural characterization of Set1 RNA recognition motifs and their role in histone H3 lysine 4 methylation

L Trésaugues, PM Dehé, R Guérois… - Journal of molecular …, 2006 - Elsevier
The yeast Set1 histone H3 lysine 4 (H3K4) methyltransferase contains, in addition to its
catalytic SET domain, a conserved RNA recognition motif (RRM1). We present here the …

PAR-CLIP data indicate that Nrd1-Nab3-dependent transcription termination regulates expression of hundreds of protein coding genes in yeast

S Webb, RD Hector, G Kudla, S Granneman - Genome biology, 2014 - Springer
Abstract Background Nrd1 and Nab3 are essential sequence-specific yeast RNA binding
proteins that function as a heterodimer in the processing and degradation of diverse classes …

[HTML][HTML] Mapping targets for small nucleolar RNAs in yeast

T Dudnakova, H Dunn-Davies, R Peters… - Wellcome open …, 2018 - ncbi.nlm.nih.gov
Background: Recent analyses implicate changes in the expression of the box C/D class of
small nucleolar RNAs (snoRNAs) in several human diseases. Methods: Here we report the …

The Nrd1–Nab3–Sen1 transcription termination complex from a structural perspective

B Chaves-Arquero… - Biochemical Society …, 2023 - portlandpress.com
A substantial part of living cells activity involves transcription regulation. The RNA
polymerases responsible for this job need to know 'where/when'to start and stop in the …

The multiple faces of Set1

PM Dehe, V Geli - Biochemistry and cell biology, 2006 - cdnsciencepub.com
In Saccharomyces cerevisiae, H3 methylation at lysine 4 (H3K4) is mediated by Set1. Set1 is
a large protein bearing a conserved RNA recognition motif in addition to its catalytic C …

Binding to RNA regulates Set1 function

P Luciano, J Jeon, A El-Kaoutari, D Challal, A Bonnet… - Cell Discovery, 2017 - nature.com
The Set1 family of histone H3 lysine 4 (H3K4) methyltransferases is highly conserved from
yeast to human. Here we show that the Set1 complex (Set1C) directly binds RNA in vitro …

Molecular insight into the SETD1A/B N-terminal region and its interaction with WDR82

S Bao, C Xu - Biochemical and Biophysical Research …, 2023 - Elsevier
Abstract SETD1A and SETD1B originate from Set1, the sole H3K4 methyltransferase in
yeast, and they play important roles in active gene transcription. Here, we present the crystal …