Beyond Rule of Five and PROTACs in Modern Drug Discovery: Polarity Reducers, Chameleonicity, and the Evolving Physicochemical Landscape
E Price, M Weinheimer, A Rivkin… - Journal of Medicinal …, 2024 - ACS Publications
Developing orally bioavailable drugs demands an understanding of absorption in early drug
development. Traditional methods and physicochemical properties optimize absorption for …
development. Traditional methods and physicochemical properties optimize absorption for …
[HTML][HTML] PROTACs and building blocks: The 2D chemical space in very early drug discovery
Targeted protein degradation by PROTACs has emerged as a new modality for the
knockdown of a range of proteins, and, more recently, it has become increasingly clear that …
knockdown of a range of proteins, and, more recently, it has become increasingly clear that …
Impact of dynamically exposed polarity on permeability and solubility of chameleonic drugs beyond the rule of 5
M Rossi Sebastiano, BC Doak… - Journal of medicinal …, 2018 - ACS Publications
Conformational flexibility has been proposed to significantly affect drug properties outside
rule-of-5 (Ro5) chemical space. Here, we investigated the influence of dynamically exposed …
rule-of-5 (Ro5) chemical space. Here, we investigated the influence of dynamically exposed …
[PDF][PDF] Oral druggable space beyond the rule of 5: insights from drugs and clinical candidates
The rule of 5 (Ro5) is a set of in silico guidelines applied to drug discovery to prioritize
compounds with an increased likelihood of high oral absorption. It has been influential in …
compounds with an increased likelihood of high oral absorption. It has been influential in …
Bioisostere Effects on the EPSA of Common Permeability-Limiting Groups
AK Ecker, DA Levorse, DA Victor… - ACS Medicinal …, 2022 - ACS Publications
Polar molecular surface area provides a valuable metric when optimizing properties as
varied as membrane permeability and efflux susceptibility. The EPSA method to measure …
varied as membrane permeability and efflux susceptibility. The EPSA method to measure …
Chamelogk: A Chromatographic Chameleonicity Quantifier to Design Orally Bioavailable Beyond-Rule-of-5 Drugs
D Garcia Jimenez, M Vallaro… - Journal of Medicinal …, 2023 - ACS Publications
New chemical modalities in drug discovery include molecules belonging to the bRo5
chemical space. Because of their complex and flexible structure, bRo5 compounds often …
chemical space. Because of their complex and flexible structure, bRo5 compounds often …
Rational control of molecular properties is mandatory to exploit the potential of PROTACs as oral drugs
G Ermondi, D Garcia Jimenez… - ACS Medicinal …, 2021 - ACS Publications
To obtain new oral drugs in the beyond rule of five space, PROTACs among others,
molecular properties should be optimized in early drug discovery. Degraders call for design …
molecular properties should be optimized in early drug discovery. Degraders call for design …
Design principles for balancing lipophilicity and permeability in beyond rule of 5 space
H Möbitz - ChemMedChem, 2024 - Wiley Online Library
An ab initio conformational analysis of oral beyond Rule of 5 (bRo5) drugs was
complemented with measured permeability and logP (octanol) to derive design principles …
complemented with measured permeability and logP (octanol) to derive design principles …
Designing soluble PROTACs: strategies and preliminary guidelines
D García Jiménez, M Rossi Sebastiano… - Journal of Medicinal …, 2022 - ACS Publications
Solubility optimization is a crucial step to obtaining oral PROTACs. Here we measured the
thermodynamic solubilities (log S) of 21 commercial PROTACs. Next, we measured BRlogD …
thermodynamic solubilities (log S) of 21 commercial PROTACs. Next, we measured BRlogD …
Cell permeability beyond the rule of 5
Drug discovery for difficult targets that have large and flat binding sites is often better suited
to compounds beyond the “rule of 5”(bRo5). However, such compounds carry higher …
to compounds beyond the “rule of 5”(bRo5). However, such compounds carry higher …