Medium-chain alkane biodegradation and its link to some unifying attributes of alkB genes diversity

EO Fenibo, R Selvarajan, ALK Abia… - Science of The Total …, 2023 - Elsevier
Hydrocarbon footprints in the environment, via biosynthesis, natural seepage,
anthropogenic activities and accidents, affect the ecosystem and induce a shift in the healthy …

[HTML][HTML] The Use of a Combination of alkB Primers to Better Characterize the Distribution of Alkane-Degrading Bacteria

D Jurelevicius, VM Alvarez, R Peixoto, AS Rosado… - PloS one, 2013 - journals.plos.org
The alkane monooxygenase AlkB, which is encoded by the alkB gene, is a key enzyme
involved in bacterial alkane degradation. To study the alkB gene within bacterial …

Evaluating the Assignment of alkB Terminal Restriction Fragments and Sequence Types to Distinct Bacterial Taxa

J Giebler, LY Wick, M Schloter, H Harms… - Applied and …, 2013 - Am Soc Microbiol
Sequence and terminal restriction fragment length polymorphism (T-RFLP) analyses
revealed multiple alkB gene copies/cell in soil bacterial isolates and an apparently high …

Assessing the role of alkane hydroxylase genotypes in environmental samples by competitive PCR

S Heiss‐Blanquet, Y Benoit… - Journal of Applied …, 2005 - academic.oup.com
Aims: A molecular tool for extensive detection of prokaryotic alkane hydroxylase genes
(alkB) was developed. AlkB genotypes involved in the degradation of short‐chain alkanes …

Characterization of two alkane hydroxylase genes from the marine hydrocarbonoclastic bacterium Alcanivorax borkumensis

JB Van Beilen, MM Marín, THM Smits… - Environmental …, 2004 - Wiley Online Library
Summary The marine γ‐Proteobacterium Alcanivorax borkumensis is highly specialized in
the assimilation of aliphatic hydrocarbons, and makes up a large part of the biomass in oil …

Distribution of alkB genes within n‐alkane‐degrading bacteria

A Vomberg, U Klinner - Journal of Applied Microbiology, 2000 - academic.oup.com
Fifty‐four bacterial strains belonging to 37 species were tested for their ability to assimilate
short chain and/or medium chain liquid n‐alkanes. A gene probe derived from the alkB gene …

[HTML][HTML] Diverse alkane hydroxylase genes in microorganisms and environments

Y Nie, CQ Chi, H Fang, JL Liang, SL Lu, GL Lai… - Scientific reports, 2014 - nature.com
AlkB and CYP153 are important alkane hydroxylases responsible for aerobic alkane
degradation in bioremediation of oil-polluted environments and microbial enhanced oil …

Abundance and Diversity of n-Alkane-Degrading Bacteria in a Forest Soil Co-Contaminated with Hydrocarbons and Metals: A Molecular Study on alkB …

A Pérez-de-Mora, M Engel, M Schloter - Microbial ecology, 2011 - Springer
Unraveling functional genes related to biodegradation of organic compounds has
profoundly improved our understanding of biological remediation processes, yet the ecology …

Alkane biodegradation in Pseudomonas aeruginosa strains isolated from a polluted zone: identification of alkB and alkB-related genes

A Belhaj, N Desnoues, C Elmerich - Research in Microbiology, 2002 - Elsevier
Pseudomonas aeruginosa strains that grow on crude oil as the sole source of carbon and
energy were isolated from an environment in Morocco polluted by petroleum refinery …

[HTML][HTML] New frontiers of anaerobic hydrocarbon biodegradation in the multi-omics era

K Laczi, Á Erdeiné Kis, Á Szilágyi… - Frontiers in …, 2020 - frontiersin.org
The accumulation of petroleum hydrocarbons in the environment substantially endangers
terrestrial and aquatic ecosystems. Many microbial strains have been recognized to utilize …