[HTML][HTML] Spatial genomics maps the structure, nature and evolution of cancer clones
Genome sequencing of cancers often reveals mosaics of different subclones present in the
same tumour,–. Although these are believed to arise according to the principles of somatic …
same tumour,–. Although these are believed to arise according to the principles of somatic …
Spatial genomics enables multi-modal study of clonal heterogeneity in tissues
The state and behaviour of a cell can be influenced by both genetic and environmental
factors. In particular, tumour progression is determined by underlying genetic aberrations …
factors. In particular, tumour progression is determined by underlying genetic aberrations …
Dynamics of genomic clones in breast cancer patient xenografts at single-cell resolution
Human cancers, including breast cancers, comprise clones differing in mutation content.
Clones evolve dynamically in space and time following principles of Darwinian evolution …
Clones evolve dynamically in space and time following principles of Darwinian evolution …
Tumour evolution inferred by single-cell sequencing
N Navin, J Kendall, J Troge, P Andrews, L Rodgers… - Nature, 2011 - nature.com
Genomic analysis provides insights into the role of copy number variation in disease, but
most methods are not designed to resolve mixed populations of cells. In tumours, where …
most methods are not designed to resolve mixed populations of cells. In tumours, where …
Subclonal diversification of primary breast cancer revealed by multiregion sequencing
The sequencing of cancer genomes may enable tailoring of therapeutics to the underlying
biological abnormalities driving a particular patient's tumor. However, sequencing-based …
biological abnormalities driving a particular patient's tumor. However, sequencing-based …
Clonal evolution in breast cancer revealed by single nucleus genome sequencing
Sequencing studies of breast tumour cohorts have identified many prevalent mutations, but
provide limited insight into the genomic diversity within tumours. Here we developed a …
provide limited insight into the genomic diversity within tumours. Here we developed a …
Quantification of subclonal selection in cancer from bulk sequencing data
Subclonal architectures are prevalent across cancer types. However, the temporal
evolutionary dynamics that produce tumor subclones remain unknown. Here we measure …
evolutionary dynamics that produce tumor subclones remain unknown. Here we measure …
Selection of metastasis competent subclones in the tumour interior
The genetic evolutionary features of solid tumour growth are becoming increasingly well
described, but the spatial and physical nature of subclonal growth remains unclear. Here …
described, but the spatial and physical nature of subclonal growth remains unclear. Here …
Whole-genome single-cell copy number profiling from formalin-fixed paraffin-embedded samples
LG Martelotto, T Baslan, J Kendall, FC Geyer… - Nature medicine, 2017 - nature.com
A substantial proportion of tumors consist of genotypically distinct subpopulations of cancer
cells. This intratumor genetic heterogeneity poses a substantial challenge for the …
cells. This intratumor genetic heterogeneity poses a substantial challenge for the …
[HTML][HTML] Spatially resolved clonal copy number alterations in benign and malignant tissue
A Erickson, M He, E Berglund, M Marklund… - Nature, 2022 - nature.com
Defining the transition from benign to malignant tissue is fundamental to improving early
diagnosis of cancer. Here we use a systematic approach to study spatial genome integrity in …
diagnosis of cancer. Here we use a systematic approach to study spatial genome integrity in …