The determinants of alternative RNA splicing in human cells
TV Ramanouskaya, VV Grinev - Molecular Genetics and Genomics, 2017 - Springer
Alternative splicing represents an important level of the regulation of gene function in
eukaryotic organisms. It plays a critical role in virtually every biological process within an …
eukaryotic organisms. It plays a critical role in virtually every biological process within an …
Genomics of alternative splicing: evolution, development and pathophysiology
ER Gamazon, BE Stranger - Human genetics, 2014 - Springer
Alternative splicing is a major cellular mechanism in metazoans for generating proteomic
diversity. A large proportion of protein-coding genes in multicellular organisms undergo …
diversity. A large proportion of protein-coding genes in multicellular organisms undergo …
[PDF][PDF] Genomic analysis of RNA alternative splicing in cancers
Y Xing - Front Biosci, 2007 - article.imrpress.com
[Frontiers in Bioscience 12, 4034-4041, May 1, 2007] 4034 Genomic analysis of RNA
alternative splicing in cancers Yi Xing Depar Page 1 [Frontiers in Bioscience 12, 4034-4041 …
alternative splicing in cancers Yi Xing Depar Page 1 [Frontiers in Bioscience 12, 4034-4041 …
Alternative splicing in cancer: noise, functional, or systematic?
RI Skotheim, M Nees - The international journal of biochemistry & cell …, 2007 - Elsevier
Pre-messenger RNA splicing is a fine-tuned process that generates multiple functional
variants from individual genes. Various cell types and developmental stages regulate …
variants from individual genes. Various cell types and developmental stages regulate …
Selecting Differential Splicing Methods: Practical Considerations
BJ Draper, MJ Dunning, DC James - arXiv preprint arXiv:2409.05458, 2024 - arxiv.org
Alternative splicing is crucial in gene regulation, with significant implications in clinical
settings and biotechnology. This review article compiles bioinformatics RNA-seq tools for …
settings and biotechnology. This review article compiles bioinformatics RNA-seq tools for …
A general definition and nomenclature for alternative splicing events
Understanding the molecular mechanisms responsible for the regulation of the
transcriptome present in eukaryotic cells is one of the most challenging tasks in the …
transcriptome present in eukaryotic cells is one of the most challenging tasks in the …
A network of conserved co-occurring motifs for the regulation of alternative splicing
M Suyama, ED Harrington, S Vinokourova… - Nucleic acids …, 2010 - academic.oup.com
Cis-acting short sequence motifs play important roles in alternative splicing. It is now
possible to identify such sequence motifs as conserved sequence patterns in genome …
possible to identify such sequence motifs as conserved sequence patterns in genome …
Alternative splicing modulates stem cell differentiation
Stem cells have the surprising potential to develop into many different cell types. Therefore,
major research efforts have focused on transplantation of stem cells and/or derived …
major research efforts have focused on transplantation of stem cells and/or derived …
[HTML][HTML] Integrative analysis of many RNA-seq datasets to study alternative splicing
Alternative splicing is an important gene regulatory mechanism that dramatically increases
the complexity of the proteome. However, how alternative splicing is regulated and how …
the complexity of the proteome. However, how alternative splicing is regulated and how …
Splicing Express: a software suite for alternative splicing analysis using next-generation sequencing data
Motivation. Alternative splicing events (ASEs) are prevalent in the transcriptome of
eukaryotic species and are known to influence many biological phenomena. The …
eukaryotic species and are known to influence many biological phenomena. The …