DEELIG: A deep learning approach to predict protein-ligand binding affinity
Protein-ligand binding prediction has extensive biological significance. Binding affinity helps
in understanding the degree of protein-ligand interactions and is a useful measure in drug …
in understanding the degree of protein-ligand interactions and is a useful measure in drug …
Effects of data quality and quantity on deep learning for protein-ligand binding affinity prediction
FJ Fan, Y Shi - Bioorganic & Medicinal Chemistry, 2022 - Elsevier
Prediction of protein-ligand binding affinities is crucial for computational drug discovery. A
number of deep learning approaches have been developed in recent years to improve the …
number of deep learning approaches have been developed in recent years to improve the …
[HTML][HTML] Scoring functions for protein-ligand binding affinity prediction using structure-based deep learning: A review
The rapid and accurate in silico prediction of protein-ligand binding free energies or binding
affinities has the potential to transform drug discovery. In recent years, several deep learning …
affinities has the potential to transform drug discovery. In recent years, several deep learning …
[HTML][HTML] Binding affinity prediction for protein–ligand complex using deep attention mechanism based on intermolecular interactions
Background Accurate prediction of protein–ligand binding affinity is important for lowering
the overall cost of drug discovery in structure-based drug design. For accurate predictions …
the overall cost of drug discovery in structure-based drug design. For accurate predictions …
DeepDTAF: a deep learning method to predict protein–ligand binding affinity
Biomolecular recognition between ligand and protein plays an essential role in drug
discovery and development. However, it is extremely time and resource consuming to …
discovery and development. However, it is extremely time and resource consuming to …
FABind: Fast and accurate protein-ligand binding
Modeling the interaction between proteins and ligands and accurately predicting their
binding structures is a critical yet challenging task in drug discovery. Recent advancements …
binding structures is a critical yet challenging task in drug discovery. Recent advancements …
Statistical and machine learning approaches to predicting protein–ligand interactions
LJ Colwell - Current opinion in structural biology, 2018 - Elsevier
Data driven computational approaches to predicting protein–ligand binding are currently
achieving unprecedented levels of accuracy on held-out test datasets. Up until now …
achieving unprecedented levels of accuracy on held-out test datasets. Up until now …
DeepDTA: deep drug–target binding affinity prediction
Motivation The identification of novel drug–target (DT) interactions is a substantial part of the
drug discovery process. Most of the computational methods that have been proposed to …
drug discovery process. Most of the computational methods that have been proposed to …
From Proteins to Ligands: Decoding Deep Learning Methods for Binding Affinity Prediction
R Gorantla, A Kubincova, AY Weiße… - Journal of Chemical …, 2023 - ACS Publications
Accurate in silico prediction of protein–ligand binding affinity is important in the early stages
of drug discovery. Deep learning-based methods exist but have yet to overtake more …
of drug discovery. Deep learning-based methods exist but have yet to overtake more …
Artificial intelligence in the prediction of protein–ligand interactions: recent advances and future directions
New drug production, from target identification to marketing approval, takes over 12 years
and can cost around $2.6 billion. Furthermore, the COVID-19 pandemic has unveiled the …
and can cost around $2.6 billion. Furthermore, the COVID-19 pandemic has unveiled the …